Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1387 ATGCAAAATCACCTTCGCCTTCTATACTTCTGTTCGATTTCTTCTTCTTCTTCTGCCTTGGATCCTACATTTTGCAACTCCTCGTTGCCAAAATTGTACCAACGATTTACCTACGTTCCCAACTTTTCATCTCTCTACTTGAAGAAAATGCCTGTCCATCTACACATTGCTTCATTTCTCATATGCTTCTTGGCTCCATTCACTACCCCTCTTAATTCTGATGGACTCTCTCTTCTCGCCCTCAAAGCCGCCATTGACTCCGACCCTTCCGGCATTCTGGACTCGTGGTCCGACTCCGATTCCACCCCCTGTTGTTGGGCCGGTGTCATCTGCGCCCATAACCGAGTCACCCAACTTAATCTTCCTAGAAAAGCCTTAACTGGCTATATCCCCTCTGAACTTGGTTTGCTTAACTCCCTCAAACGACTCAGTCTTCCCCACAACAACTTCTCCAACGTAGTTCCTTCCAATCTGTTCAACGCCACCAATCTTGTTGTTGTGGACCTGTCTCATAATTCCCTCTTTGGTCCAATCCCTACTGAAATCAGGTCTCTCAAATTTCTCAGACATTTGGATTTATCCAGTAATTTGCTTAATGGAACTATCCCTGAAGCTCTCGCCGATCTCACTAGCCTCGTCGGAACCTTAAATCTCTCTCACAATCTCTTCTCCGGCAGAGTCCCAGAGTCTCTCGGGAGACTCCCTATGATAGTGAGGTTGGATCTCCAGAACAACAATTTATCTGGAAAAATTCCTCAGGTAGGTTCGCTGCAAAACCAGGGCCCAACAGCTTTCTCTGGCAACCCTGGGCTTTGTGGGTTTCCTTTGCAGAATGCATGCTCAGAAGAAGCTCAAAAGCCTGAGATTTCCAGCAGCACTGAACATCCTCGACACCCCAAAACCCTTAATTCGGACTTACTAAGTAGAGATCAAGAAGTGAAGGTGAAAGAGCGAGCTGGGTTTGTCACTGTCCCCATAATTTCCAGCGTCTCATTGGTGGTTGGGGCTGTTTCGTTCTCAGTGTGGCTGTTACGAAGAAAATGGGCAGCTGGCGACGGCAAATTGAGACAACAAAAATTAGACAGTGAGGTTGATAAAGACGAAGAAGAAGGGGAAACGGGTAAATTCGTGGTGGTTGATGACGGGTTTAATTTGGAACTAGAGGATTTATTTAGGGCATCTGCTTTTGTAGTTGGGAAAAGCAGGAGTGGAATCGTGTATAAGGTAGTGGCTACTGGGAAGCGGTCGTGCCCGGCGACGACAGTGGTGGTTGTCAGGCGGTTATGTGAGGATAATGTCCCGTGGCGTCTCAAGGAGTTTGAATCGGAGGCGGAGGCCATTTGTGGGGTCCATCACCCTAATATTGTCCCACTGAGAGCATATTACTATGCAAATGATGAGAAACTGCTCATCACTGATTTCATTCGCAATGGAAGCTTGCACGCTGCCCTGCATGGTATCACTTCTCTCACATCCTTTCTTTCTTCATTTTTAATTTCTCTGGCTCTCTGTCGCGTGGTTGAATTGCCTGGCTGTGATATGAGAGGGCCTTCTAATTCTTTGCCACCATTGTCATTGGCAACGAGATTAAGAATTGCCCAAGGAGCTGCAAGGGGTTTGATGTACCTACACGAGTTTGGTGGTAAAAAATATATCCATGGCAACCTGAAATCAACTAAGATATTACTGGATGATGATCTCCATCCTTGTATATCTGGTTTAGGATTTACTCGTCTTGGTTTGAGGTCCTCAAAGTTTGCACCAAGACAGAACTCAAAACAGTCTATTGTAACCTCGTCTACGCATTCAAAAGTAGAAGCTTCATCTAACTACTACTTGGCCCCTGAGGTACGCATTCTTGGTGGGAAGTACACTCAGAAATGTGATGTGTACTCCTTTGGAATAGTGCTTTTAGAACTTTTGACGGGTAGGCTGCCACATTCAGGACCAGAAAATGATGGTAAGACATTGGAAAATTTTGTGAGGAAAGCATTCAGGGAGGAGCAACCCTTTTCTGAGATTATAGATCCAAAACTTCGGCCCGAGGCATATGCTAAGAAACAAGTGATTGCAGCATTTCACATTGCACTAAACTGCACAGAACATAACCCAGAGTTGCGACCTAAAATGAGAACTGCGTCTGAGAGCCTTGATCGCATCAAATTACATTGA 2172 0.4553 MQNHLRLLYFCSISSSSSALDPTFCNSSLPKLYQRFTYVPNFSSLYLKKMPVHLHIASFLICFLAPFTTPLNSDGLSLLALKAAIDSDPSGILDSWSDSDSTPCCWAGVICAHNRVTQLNLPRKALTGYIPSELGLLNSLKRLSLPHNNFSNVVPSNLFNATNLVVVDLSHNSLFGPIPTEIRSLKFLRHLDLSSNLLNGTIPEALADLTSLVGTLNLSHNLFSGRVPESLGRLPMIVRLDLQNNNLSGKIPQVGSLQNQGPTAFSGNPGLCGFPLQNACSEEAQKPEISSSTEHPRHPKTLNSDLLSRDQEVKVKERAGFVTVPIISSVSLVVGAVSFSVWLLRRKWAAGDGKLRQQKLDSEVDKDEEEGETGKFVVVDDGFNLELEDLFRASAFVVGKSRSGIVYKVVATGKRSCPATTVVVVRRLCEDNVPWRLKEFESEAEAICGVHHPNIVPLRAYYYANDEKLLITDFIRNGSLHAALHGITSLTSFLSSFLISLALCRVVELPGCDMRGPSNSLPPLSLATRLRIAQGAARGLMYLHEFGGKKYIHGNLKSTKILLDDDLHPCISGLGFTRLGLRSSKFAPRQNSKQSIVTSSTHSKVEASSNYYLAPEVRILGGKYTQKCDVYSFGIVLLELLTGRLPHSGPENDGKTLENFVRKAFREEQPFSEIIDPKLRPEAYAKKQVIAAFHIALNCTEHNPELRPKMRTASESLDRIKLH 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1387 723 Gene3D Ribonuclease Inhibitor 127 288 IPR032675 -
Dere02g1387 723 Gene3D Ribonuclease Inhibitor 71 126 IPR032675 -
Dere02g1387 723 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 59 721 IPR046959 -
Dere02g1387 723 FunFam Leucine-rich repeat receptor-like protein kinase 189 282 - -
Dere02g1387 723 Pfam Protein tyrosine and serine/threonine kinase 398 715 IPR001245 GO:0004672|GO:0006468
Dere02g1387 723 Gene3D Phosphorylase Kinase; domain 1 378 474 - -
Dere02g1387 723 FunFam Leucine-rich repeat receptor-like kinase 76 188 - -
Dere02g1387 723 SUPERFAMILY L domain-like 74 277 - -
Dere02g1387 723 Gene3D Transferase(Phosphotransferase) domain 1 515 723 - -
Dere02g1387 723 MobiDBLite consensus disorder prediction 288 309 - -
Dere02g1387 723 SUPERFAMILY Protein kinase-like (PK-like) 397 718 IPR011009 -
Dere02g1387 723 MobiDBLite consensus disorder prediction 283 309 - -
Dere02g1387 723 Pfam Leucine rich repeat N-terminal domain 72 111 IPR013210 -
Dere02g1387 723 ProSiteProfiles Protein kinase domain profile. 392 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1387 Dere-ChrDere02 13392430 13395519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1387 71 721 Receptor kinase-like Gene Family AT3G57830 56.072 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere02g1387 PK_Tyr_Ser-Thr 1.6e-25 CL0016