Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere02g1382 | ATGGATAGTACATTAGGCTACGTATCAGTCTTGTTGATGTCGTTAGTCTCCGTAGTGTTTTTTCGATCTATATTCACTCGAACTCAGTCAAAACTTCGCCTTCCACCAAGTCCAATGGCCTTACCGATCATAGGACACTTGCACCTATTGCAAACACCTCCTCATGGATCACTCCAGAAGCTCTCAAACCGTTATGGACCCTTGATTCACATCTATTTTGGCTCTCTCCCCTTTGTTATTGTATCTTCTGCAGAAATAGCTAAAGAGGTCTTGAAAACCCATGAAATGTCCTTCTGTAACCGACCTGCCAACGCTGCCATTCGTTATCTCACGTACAACGCATCTGATTTAGCATTCTCTCCTTATGGAACCTACTGGAAGTTCTTGAAGAAGCTTTGTATGTCAGAGCTTCTTAACGGTCGTATGCTGGATCAACTTCTTCCGATTAGGCAGGAAGAGATAAGGCGGCTCCTGCAGACGATGCTGAATAAAGGTGAAGTGGGTGAGGCTGTGAATGTTGGAGCAGAGGTTTCAAAGCTAATAAACAGTATAGTGATGAGAATGTCAATAAGCAAGAGCTACTTTCACACGGAGGAAGAAGCGCGTGAGGTGACGGAGCGGGTGAAAGAGTCAGCCAAGCTGTCTGGGATGTTTAACTTGTCTGATTATTTTTGGTTTTGTAAGAATCTGGATCTCCAGGGAATTGGGAAGAGGCTCAAGGAGGTTGGTGATAGGTTCGACACTATGATGGAAGGTATCATCAAGGAGCATGAAGAGGCAAGAAACAAATCCACCAAAAAGGATACAGAAAAGGACATACTTGATGTTCTTCTAAGGATATCAAAAGAGGAAAGCTCCGAGGTTAAAATCACCAGAGACAACATCAAAGGCTTTTTGATGGATATATTATCAGGTGGCACAGATACAAGTGCTGTTAGTATAGAGTGGATACTGGCAGAACTAATAAACCACCCTACTGCGATGGAGAAGACAAGGAAGGAGATTGATTCTGTGATTGGGAAAAACAGAGTAGTAATGGAGTCGGATATCGAAGATCTTCCTTATCTTCAAGCCGTAGTGAAGGAGACAATGAGGCTTCACCCTCCAGGTCCGTTGATCATGAGGGAGTCAACCGAAACCTGCAGTGTTGGTGGCTACGACATTCCGGCAAACACTAGGGTGTTCATTAATACGTGGGCTATTGGGAGGGACCCAAAGCACTGGGATAATCCGCTACAGTTCGATCCAGAAAGATTTCTAAGAAAAGACGGAAGTGGGATGAAGAGCAATATGGAATTAGTGAGGGGACAGAATTACCAGCTTTTGCCGTTTGGAAGTGGAAGAAGGGGATGTCCTGGAGCTTCACTGGCACTGAATGTAGTTCAGACCAGTGTTGCAGCTATGATTCAGTGCTTCGAATGGAAGGTAGGGGATGGTGGGAATGGCTGTGTTGACATGGAAGAGGGACCTGAGATTACTCTTACAAGAGCTCAACCCCTGATATGTGTCCCAGTCCCCAGACTCACTCCATTTCCTTCGTTGTCCTCCTAA | 1551 | 0.45 | MDSTLGYVSVLLMSLVSVVFFRSIFTRTQSKLRLPPSPMALPIIGHLHLLQTPPHGSLQKLSNRYGPLIHIYFGSLPFVIVSSAEIAKEVLKTHEMSFCNRPANAAIRYLTYNASDLAFSPYGTYWKFLKKLCMSELLNGRMLDQLLPIRQEEIRRLLQTMLNKGEVGEAVNVGAEVSKLINSIVMRMSISKSYFHTEEEAREVTERVKESAKLSGMFNLSDYFWFCKNLDLQGIGKRLKEVGDRFDTMMEGIIKEHEEARNKSTKKDTEKDILDVLLRISKEESSEVKITRDNIKGFLMDILSGGTDTSAVSIEWILAELINHPTAMEKTRKEIDSVIGKNRVVMESDIEDLPYLQAVVKETMRLHPPGPLIMRESTETCSVGGYDIPANTRVFINTWAIGRDPKHWDNPLQFDPERFLRKDGSGMKSNMELVRGQNYQLLPFGSGRRGCPGASLALNVVQTSVAAMIQCFEWKVGDGGNGCVDMEEGPEITLTRAQPLICVPVPRLTPFPSLSS | 516 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere02g1382 | 516 | SUPERFAMILY | Cytochrome P450 | 26 | 507 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere02g1382 | 516 | FunFam | Cytochrome P450 family protein | 26 | 502 | - | - | |
| Dere02g1382 | 516 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 444 | 453 | IPR017972 | GO:0005506|GO:0016705 | |
| Dere02g1382 | 516 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere02g1382 | 516 | PRINTS | E-class P450 group I signature | 294 | 311 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere02g1382 | 516 | PRINTS | E-class P450 group I signature | 441 | 451 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere02g1382 | 516 | PRINTS | E-class P450 group I signature | 451 | 474 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere02g1382 | 516 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere02g1382 | 516 | PRINTS | E-class P450 group I signature | 397 | 421 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere02g1382 | 516 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere02g1382 | 516 | PRINTS | E-class P450 group I signature | 314 | 340 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere02g1382 | 516 | PRINTS | E-class P450 group I signature | 357 | 375 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere02g1382 | 516 | PANTHER | CYTOCHROME P450 98A9 | 8 | 509 | - | - | |
| Dere02g1382 | 516 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere02g1382 | 516 | PRINTS | P450 superfamily signature | 451 | 462 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere02g1382 | 516 | PRINTS | P450 superfamily signature | 358 | 369 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere02g1382 | 516 | PRINTS | P450 superfamily signature | 305 | 322 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere02g1382 | 516 | Pfam | Cytochrome P450 | 35 | 496 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere02g1382 | 516 | CDD | CYP93 | 66 | 504 | - | - | |
| Dere02g1382 | 516 | Gene3D | Cytochrome P450 | 25 | 502 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere02g1382 | Dere-ChrDere02 | 13336306 | 13337943 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere02g1382 | 5 | 507 | Cytochrome P450 | AT5G06900 | 48.419 | 5.67e-176 | 503 |