Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1373 ATGGCTTCTAGTGTCAACCAAACAACTACTCAACTTGAACCACTCCTACCACCTCCACATCGTCGTCGTCATCATCAGCAACCCCAACATCATATACAAGACCATAATATTTCTTTCGGAATGATGCAGTCTTCTTCTCCGTCGTTCTCTATCCCCGAAAACTACCTAAGCAAGGATTCTGGAGCCTATGATCTGACTGATTTGGATCAAGCCCTTTTTCTCTATCTTGATGGACAACCAGACCCATCCAATGTTCAACAACAAAGACAGAACTCATCATCGTCAGGAATGAGGCGTCCGACTCTCAACATGTTCCCATCTCAGCCTATGCGCGTACACCCTCCCTCAACCAAGCCTAGCATGGAATTAGTTCACCCACAAGTAAGCAGTGGTTCTAAAAGACCATCAGAGCCGTCAATGGACTTGGCCAACGCGCAAAACGAAGCCGCCTCGGCCCCTGAACAACCCAAAACGGTCAAACGAGAGAGCAATCGCAAGGGTACAACGTTAAGTTCTGAACAAGAAGCACCCAAAACCCCAGATCCGAAGACTCTCAGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGGAAAAAGGCATACGTTCAGCAGCTAGAGTCAAGTAGAATTAGGCTTAATCAACTGGAGCAAGAGCTACATAGTGCTAGAGCTCAAGGCTTATTCGTTGGCGGAGTTGCAGCTTTGGGAGGAGAACAAGGCCTTCCAATGGCTATGAGCAGCTTTAGCTCAGATGCTGCAATGTTTGACGTAGAATATGCGAGATGGCTTGAAGAGCACCACCGAATAGTGTGCGAGCTAAGAGCAGCAGTTCAAGAGCACCTTCCTGAGAACGAGCTTCGGCTGTTTGTTGATAATTGCTTGGCTCATTATGACCAAGTAATGAACCTGAAGAGCATTGTGGCCAAAACAGACGTATTCCATATTGTGTCTGGCATGTGGAAGACCCCAGCCGAACGTTGCTTCATGTGGATCGGTGGGTTCAGACCATCTGAACTCATCAAGATTATTATGAGTCAAATTGAGCCGCTGACTGAGCAACAAATAATGGGTATATATGGATTGCAACAATCTACGCAAGAGGCGGAGGATGCTCTCTCCCAAGGGCTCGAGGCTCTCAATCAATCTCTCTCGGACACTATAACATCAGGCTCATTGAGCTGTCCAGCCAACATGGCTAACTACATGGGACAGATGGCCATGGCCATAAATAAGCTGTCGACTCTTGAAGGTTTCGTAAGACAGGCAGATAATCTGCGGCAGCAGACCATTCACCGTCTGCATGAGATACTGACGACGCGTCAAGCAGCGAGGTGTCTGTTGGCCATCGCCGAGTACTTCCATCGTCTCCGAGCACTCAGTTCTCTGTGGATGGGACGTCCTCGTCAAGAATAA 1425 0.4807 MASSVNQTTTQLEPLLPPPHRRRHHQQPQHHIQDHNISFGMMQSSSPSFSIPENYLSKDSGAYDLTDLDQALFLYLDGQPDPSNVQQQRQNSSSSGMRRPTLNMFPSQPMRVHPPSTKPSMELVHPQVSSGSKRPSEPSMDLANAQNEAASAPEQPKTVKRESNRKGTTLSSEQEAPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQELHSARAQGLFVGGVAALGGEQGLPMAMSSFSSDAAMFDVEYARWLEEHHRIVCELRAAVQEHLPENELRLFVDNCLAHYDQVMNLKSIVAKTDVFHIVSGMWKTPAERCFMWIGGFRPSELIKIIMSQIEPLTEQQIMGIYGLQQSTQEAEDALSQGLEALNQSLSDTITSGSLSCPANMANYMGQMAMAINKLSTLEGFVRQADNLRQQTIHRLHEILTTRQAARCLLAIAEYFHRLRALSSLWMGRPRQE 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1373 474 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 223 IPR004827 GO:0003700|GO:0006355
Dere02g1373 474 CDD bZIP_HBP1b-like 183 235 - -
Dere02g1373 474 SMART brlzneu 179 238 IPR004827 GO:0003700|GO:0006355
Dere02g1373 474 MobiDBLite consensus disorder prediction 122 153 - -
Dere02g1373 474 MobiDBLite consensus disorder prediction 77 186 - -
Dere02g1373 474 Gene3D - 182 230 - -
Dere02g1373 474 Coils Coil 202 229 - -
Dere02g1373 474 ProSiteProfiles DOG1 domain profile. 256 470 IPR025422 GO:0006351|GO:0043565
Dere02g1373 474 SUPERFAMILY Leucine zipper domain 183 224 IPR046347 GO:0003700|GO:0006355
Dere02g1373 474 Pfam Seed dormancy control 274 349 IPR025422 GO:0006351|GO:0043565
Dere02g1373 474 MobiDBLite consensus disorder prediction 1 31 - -
Dere02g1373 474 MobiDBLite consensus disorder prediction 80 102 - -
Dere02g1373 474 Pfam bZIP transcription factor 183 221 IPR004827 GO:0003700|GO:0006355
Dere02g1373 474 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Dere02g1373 474 PANTHER TRANSCRIPTION FACTOR TGA9 112 473 - -
Dere02g1373 474 FunFam BZIP family transcription factor 182 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1373 Dere-ChrDere02 13236844 13242621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1373 54 474 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 61.573 0.0 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere02g1373 DOG1 1.4e-31 No_clan