Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1366 ATGATCCACCTGCGAAAGTTAAGATTAACATTTACTCTCCAATGGCCTGCTTCCGATTTTGTTCAATCTCATCTTAGGTCAGCGGAAAACCCACTAGGGCCTAATGGATTGTTCCGCGTTGTCCGAAACCCTAGACTGTACGGAAATGTAAGAGCAGTTCAACCTGCCCATTGTCAAGACCTTGAAGCGGCTTTCACTGCTGTCGGTCGCACCATTCGGGAGGCCCGAAAAATAGCCAAAGCTGCATTATTGGAGTATCTGCATTCTACTAGAAGCATCCAGTACTTGGATGCAGATAATATGAGTAGAAACTCGCCTTATTTTCTTGAGGAGCTTCTGAAGAAAGTAGACAAAGAGGAGGACATCGAACGATCAGTTACCCGGTATTTGCGTTACCATCCTATCAATGAATTTGAACCCTTTTTCGAAAGCATAGGTTTGAAACCTTCCGAATATGTGTCTCTTCTACCGAAAAATATGATTTTTTTGAGTGATGACCAACTGTTGCTGGAAAACTATTACGCCCTTTGTAACTTTGGGATTCCACGTAATAAGATGGGAAGGATTTATAAGGAAGCAACTGAAGTGTTTAGCTATGCTCATGGGGTTTTACCGTTAAAGCTTCAAGCTTATGAAAAATTGGGTCTCGGCCAGTCTACTCTAGTAAAAGTTATTGCTTCTAGTCCATACCTTCTGATTGGGGATTGTAACCTGGATTTTATCAAGGTTATAGAGAAATTGAAGCATTCTGTGAATGATATTAATTGGATTGAGGGGCGTTTATTGGATGGGGCTTCTTATAATTGGAGCCAGATGCTTAGGCTCTTATGCTCGCTTGACAAGATTTTGGGTGAGCAACAGTTGGCTGACATTATCAACCAGCGCGCTGACCTTCTCTTTGAGGAATCAGGAGGTAGGACACTCTACCTTATCGGCTTCTTGTTAAAATTTGGATTGTCAATGAATCAAATGTCCCTCATATTTCTAAACTTTCCGCAAATTCAAGTAGGCAAATTCCTTTCGAATTTGAAGCATTGTTTTCTATTCTTAAGAGAAGTTGACATGGAGCCTGCAGAGATTGGGAAGATTTTCCGCTTACACTCCTTAGTATTGGGTTCATTCACTTTGAAAAAAACAAATAGTTTACTTTCTAACCTGAATGTTGGCAAGAAGCGACTTCGGATGATCATACAGGATAATCCGCTAGAATTGAAGAATTGGGCACTGGGAAGAAGAGTTAAGCCTTTGCCAAACACCGAGGAAGAGCAAATATCCCGGTTGCGGAAGACAGAGTTTTTGTTGAGCTTGGGATATGAAGAAGACTCGAAAAAAATGAAAGAAGCATTTAAGGTATTCAGAGGTAAGGGAGCAGAACTCCAAGAGAGGTTCGATTGTATTGTTAACGCTGGCTTGGATAGTCGGGACGTGCAGGAAATGATTAGAGTTTCCCCTCAGATTCTTAACCTTACTACAGATGCGATCAACATGAAACTTGACTATCTTGTGAATGAACTAGGATATCCCGTATCATCTTTAGTGAACTTCCCATCTTATCTTTCCTACAAATCCGAAAGAGTCAAGCTTAGGTTGTCAATGTACAAGTGGCTTATCGATAAGGGAACTGCTGATCCCAAGCTTTCTTTGAGCACTATAGTTGCTTGCACAGAGAAAGTATTCATAGAACAGTATGTAAATCGTCATCCAAGTGGCCCTCAAGTTTGGCAGGATTTGAAGGATAAAATTTATTCTAAGAATTAA 1758 0.4078 MIHLRKLRLTFTLQWPASDFVQSHLRSAENPLGPNGLFRVVRNPRLYGNVRAVQPAHCQDLEAAFTAVGRTIREARKIAKAALLEYLHSTRSIQYLDADNMSRNSPYFLEELLKKVDKEEDIERSVTRYLRYHPINEFEPFFESIGLKPSEYVSLLPKNMIFLSDDQLLLENYYALCNFGIPRNKMGRIYKEATEVFSYAHGVLPLKLQAYEKLGLGQSTLVKVIASSPYLLIGDCNLDFIKVIEKLKHSVNDINWIEGRLLDGASYNWSQMLRLLCSLDKILGEQQLADIINQRADLLFEESGGRTLYLIGFLLKFGLSMNQMSLIFLNFPQIQVGKFLSNLKHCFLFLREVDMEPAEIGKIFRLHSLVLGSFTLKKTNSLLSNLNVGKKRLRMIIQDNPLELKNWALGRRVKPLPNTEEEQISRLRKTEFLLSLGYEEDSKKMKEAFKVFRGKGAELQERFDCIVNAGLDSRDVQEMIRVSPQILNLTTDAINMKLDYLVNELGYPVSSLVNFPSYLSYKSERVKLRLSMYKWLIDKGTADPKLSLSTIVACTEKVFIEQYVNRHPSGPQVWQDLKDKIYSKN 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1366 585 Gene3D Transcription termination factor 3, mitochondrial 307 576 IPR038538 -
Dere02g1366 585 Gene3D Transcription termination factor 3, mitochondrial 107 255 IPR038538 -
Dere02g1366 585 PANTHER CGI-12 PROTEIN-RELATED 285 567 IPR003690 GO:0003690|GO:0006355
Dere02g1366 585 FunFam mTERF family protein 115 263 - -
Dere02g1366 585 FunFam Transcription termination factor MTEF18, mitochondrial 310 577 - -
Dere02g1366 585 SMART mt_12 187 217 IPR003690 GO:0003690|GO:0006355
Dere02g1366 585 SMART mt_12 222 254 IPR003690 GO:0003690|GO:0006355
Dere02g1366 585 SMART mt_12 477 508 IPR003690 GO:0003690|GO:0006355
Dere02g1366 585 SMART mt_12 509 540 IPR003690 GO:0003690|GO:0006355
Dere02g1366 585 SMART mt_12 325 356 IPR003690 GO:0003690|GO:0006355
Dere02g1366 585 Pfam mTERF 429 559 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1366 Dere-ChrDere02 13131834 13133591 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere02g1366 mTERF 1.1e-16 No_clan