Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1365 ATGTACGACGCTCCATGGGAATCCCACATAGGAACTAACAATGCATTCAAGGTTGGAGGATCAGAACAGCAAAGTTTTGAAACCATTAGATCACCCTTCAACATCGTGTCTCCTCTGCAAACATCAGCTGCCTTGTCTGGAAGCAGAGGCTCGATGAGCTTTCACCAGCACGACCCTCAGATTGACATTCCTAGTAGTATTCTGTGTTCTGAGCTTCCAGAGAAAATAGATTCTCCCCTTCTATGTGGTCAATCTTCTGGGGATGACTTCACCGTTACCGCTAAACAAGATCCACCAGTCTCTAAACTCTGTTTCCCTGACTCTTTGCATTCTATTGTTGAATCTTTCTTGTCCAGCAGCGAGGAAAGTTTTTCTTCTTATGCAAAATATGGTGGGTTTCCTTCTGATTCAGACATGTGTAGTGATTTTCCCGGTGGCAAAATGCTTTTGTACGAGGACTTTCCACAAGTAAATAAGTTGCTGGCTAATGATACTGCTAAAGATAAGAAGCCCATTGAAATCTGCTTTCAGAGAAATCAGTCAGATAAGCAGTGTTCACGACCTTGTGGGGTTGCTTGTGTTCCACGTTCTACCAACTCTTTCTCTAGGATCCCTCCGACTGATCGTAAAAGAAGAATAAGTTGGACTAAAGATCTTCATGAGCCTTTCATCATGATTGTTAATCGCCTTGGTGGTCCTGAAAAGGCAAAGCCTAAGTCTATACTAGAGATGATGGGCTCGGATGTGCTGACCATTTCTCACGTTAAAAGTCATTTGCAGTCGGTAATAATCCTTAATGAAATTCGGTTGAACATACTTCTGCTCTACCTTGAACTGCTCAACAGGAATGCAAAGGTCAAGAGTGTAAACAAAGGATCTGGAGGTGTAAATAGACCAGATGGGATCTCTGAGCTTCAACTCAAAATCCAAAAGCAAATTGAGGAATCACGGCAACTGCAACTCGAGGTCCAAAGGAGTCTTGAAGAACAACTAGAGATGCAACGAAATGTACAACTGCTAATGGAACAGCAAAGGGAGCAGCTCAAAATAATGTTAGATCAGCAAAAGCAAAGAAGCAAACTAAAAGTGTCTGTCCCCAAATGA 1104 0.4248 MYDAPWESHIGTNNAFKVGGSEQQSFETIRSPFNIVSPLQTSAALSGSRGSMSFHQHDPQIDIPSSILCSELPEKIDSPLLCGQSSGDDFTVTAKQDPPVSKLCFPDSLHSIVESFLSSSEESFSSYAKYGGFPSDSDMCSDFPGGKMLLYEDFPQVNKLLANDTAKDKKPIEICFQRNQSDKQCSRPCGVACVPRSTNSFSRIPPTDRKRRISWTKDLHEPFIMIVNRLGGPEKAKPKSILEMMGSDVLTISHVKSHLQSVIILNEIRLNILLLYLELLNRNAKVKSVNKGSGGVNRPDGISELQLKIQKQIEESRQLQLEVQRSLEEQLEMQRNVQLLMEQQREQLKIMLDQQKQRSKLKVSVPK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1365 367 NCBIfam myb-like DNA-binding domain, SHAQKYF class 210 261 IPR006447 GO:0003677
Dere02g1365 367 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 206 358 IPR044848 GO:0003700
Dere02g1365 367 Pfam MYB-CC type transfactor, LHEQLE motif 312 357 IPR025756 -
Dere02g1365 367 SUPERFAMILY Homeodomain-like 208 262 IPR009057 -
Dere02g1365 367 Coils Coil 302 329 - -
Dere02g1365 367 Gene3D - 209 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1365 Dere-ChrDere02 13106074 13108673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1365 210 355 G2-like Transcription Factor Family AT4G28610 39.333 1.79e-23 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere02g1365 Myb_CC_LHEQLE 2.4e-07 No_clan