Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1364 ATGAACGAGAACAGAATTGATTGCCAAGGGCGGATTCAACAGAGACATGGACTAAATGGGGATTTTACTTCTGAGTTTGGCCATCGTTCTTGTCAATATTATGATATCAAACAGGCTTGGAGTATGGGTGATGGAGGAGCCGAAGAGTCACCATACATGGCCTGTGCTAAACCATCTACCACCATTATGGGTGGTTTTGAATCACCCGCTTCTGCTTTTTATGCAACAGAACGATGCATGGGGTTTTCACAATATCATTCTCAAGATAACAGTGATAATCCCCCTTTGAGCTCTCCATTTTCTAAGATTCACGATTTGGAACTCCCTTTGTATCGATCTACCAGGGAAAACACTTTCTTCAATCATTCGCCATACCGACCTGACACCAATGTCGAATTATCAAACACCTTGCAAGCAATGGTAAAATCCCAATCGAATCCAGAAAAACCCAATAAAATTCCATGTGGGATTTTGCCGATCAGCAAATTTCTTCCAATGGAACAACACACTTTGTTCATTGATGATGATGCTGCCTCAGTTAGGAGGAACCATATAGCTGGTTGTGGCTCGTATAATTTACCTGTTTCTCATTTAAGCTTCTCTTCTCAGCAAGAGAAGCCGTCTCCAACAATTTCAGCAGCAAGTGTAACAACAACTGGAAATCCTAATTCTAGTGGTGGGACAGTAATCTCAAGTAAAGCACGTATAAGATGGACTCAGGATCTTCACGAGAAGTTTGTTGAGTGTGTGAATCGCCTAGGGGGTGCTGAGAAGGCAACACCAAAAGCTATACTAAGGCTGATGGACACAGATGGGTTGACCATCTTCCATGTAAAGAGCCATTTGCAGAAATATAGACTTGCAAAATACATGCCCGACCCAGCTCAAGGCAACTCTGACAAAAGAATCAACATGGATGATGTGAATCATATTGACACCAAAACGGGCTTGCAAATTAGAGAGGCACTTCAGCTGCAGCTAGATGTTCAGAGGCGTCTCCATGAACAGCTAGAGATTCAGAGAAAATTGCAGCTTCGAATTGAAGAGCAGGGAAAGCAGCTAAAGATGATGTTTGACCAGCAGCAGAAAACAAATAATAGCGCCTTGAGCACTCAGAATTTGGGCAATACAACAAATGATGGTATACCAGTTAGTCTTAAAGAGGTTGAGGTTTCAATTTCTGAAGGGTCTGGAAATTCCTCCTTTCCTTCCTAG 1215 0.4239 MNENRIDCQGRIQQRHGLNGDFTSEFGHRSCQYYDIKQAWSMGDGGAEESPYMACAKPSTTIMGGFESPASAFYATERCMGFSQYHSQDNSDNPPLSSPFSKIHDLELPLYRSTRENTFFNHSPYRPDTNVELSNTLQAMVKSQSNPEKPNKIPCGILPISKFLPMEQHTLFIDDDAASVRRNHIAGCGSYNLPVSHLSFSSQQEKPSPTISAASVTTTGNPNSSGGTVISSKARIRWTQDLHEKFVECVNRLGGAEKATPKAILRLMDTDGLTIFHVKSHLQKYRLAKYMPDPAQGNSDKRINMDDVNHIDTKTGLQIREALQLQLDVQRRLHEQLEIQRKLQLRIEEQGKQLKMMFDQQQKTNNSALSTQNLGNTTNDGIPVSLKEVEVSISEGSGNSSFPS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1364 404 MobiDBLite consensus disorder prediction 201 229 - -
Dere02g1364 404 NCBIfam myb-like DNA-binding domain, SHAQKYF class 233 288 IPR006447 GO:0003677
Dere02g1364 404 Coils Coil 320 340 - -
Dere02g1364 404 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 221 376 IPR044848 GO:0003700
Dere02g1364 404 MobiDBLite consensus disorder prediction 360 382 - -
Dere02g1364 404 FunFam Myb family transcription factor 232 290 - -
Dere02g1364 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 230 290 IPR017930 -
Dere02g1364 404 Pfam MYB-CC type transfactor, LHEQLE motif 317 364 IPR025756 -
Dere02g1364 404 SUPERFAMILY Homeodomain-like 231 287 IPR009057 -
Dere02g1364 404 Pfam Myb-like DNA-binding domain 237 286 IPR001005 -
Dere02g1364 404 Gene3D - 232 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1364 Dere-ChrDere02 13097754 13099891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1364 217 361 G2-like Transcription Factor Family AT4G28610 57.143 5.99e-52 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere02g1364 Myb_DNA-binding 2.6e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g1364 02 13097754 13099891 Dere02g1364 02 13097754 13099891 ECH