Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1346 ATGCACATTTCTTGGGTAATCAAGTCTCAGTTAGTGGCAGTAATCTTCAGTATTATTGCCCTCATTCAAGTTAGCTGCTTTTCTTTCAATTTCCTAAACTTCCAACCACCAGATGAAGATAAATTAATTTTGAGCAAAAACTCAAAGATATACTTGGATGCCATCCAAGTGACCCCTGATATTCGTGGAGAAATATTCGATTATTCTGGACGGGTTTTCTACAGAAGGCCATATAAACTCTGGAGCAAGAGTAAGAACCAAATTGCTGCGTTTAATACCACCTTCGTGCTCAATCTCAAGCCTCAGACTTCCCCAGGAGGCGAAGGCTTGGCCTTCATATTAACTGCAGATACCAATGTTCCAGAAAACAGTGAAGGGCAATGGCTTGGAATCGTAAATGCTACAACCAATGGCACTTCTCAAGCTGCGATTTTGGCAGTAGAATTCGACACGAGAAGCAACTCCGTGGAAGATGGCCCTGACAACCATCTTGGTGTCAACATCAATAGTATCAATTCAATGAATTACGTTCCGTTAACTGACTTAGGGATCAATGTTTCATCAGGTACTAACGTAACGATGAGAATCCAGTATGCTGAAGATAAATTATCTGTCTTCGGTTCTATGAATGGAACTGCAGACTTGAAGACTCTGTTAATTTCTTCTCCTCTTAATCTGTCTTCATATCTACCAGAAGAGGTTTTCCTGGGATTTTCAGCTTCAACAAGTAACTATACGGAGTTGAACTGTGTAAGAGCTTGGGAATTCAACGGAACCCGTATTGCAGATGATAAGCAAAAGCTGTTGTGGGTCTGGATCACAGTTCCTTCAGCACTGATTTTCATAGCTGGGGTGGTCTTTCTCTTGCTTTGGCAAAGGAAGCGCCGAATGGAGAAACCAGACGATGCATACCCGAGAATAGAGGATCAGATTCAACACTCCTCTATGGCCCCGAAGAAGTTCCGACTCGGGGATATCAGAAAAGCAACAGGCAGATTTGGTCCTCAAAACAAGCTTGGGGAAGGTGGTTTTGGAACTGTCTACAAGGGGCTCTTAGAAGGTAAGGAGATAGCTGTGAAAAGGGTCTCCAAGAATTCACGTCAAGGCAAGCAAGAGTTCATAGCAGAAGTGACGATAATTGGAAGCCTGCATCACAGAAATCTGGTGAAATTAATTGGGTGGTGCTATGAGAGCCGAGAACTCCTCCTTGTCTACGAGTTCATGCCTAATGGGAGCCTCGACAAGTACCTATATGATGATGAAAAGTTTGGCTGCAAAGATGGATCAATACTAAGCTGGGGAACTAGACAAAGTGCGATATATGGGGTGGCTCAGGCACTAGACTATCTTCATAACGGGAGTGAGAAAAGAGTGCTTCATAGAGACATAAAAGCCAGCAATATCCTGTTGGACTCGGACTTCTCGGCCAAGCTGGGAGACTTTGGACTGGCTCGTACTATCCAGAAAAGAGACGAAACTCACCACTCCACAAAAGAAATTGCAGGAACACCTGGCTACATGGCTCCAGAAACCTTCCTTACTGGGAGGGCAACTGTGGAGACCGATGTGTATGCATTTGGTGTTCTGGTATTAGAAGTTGTGTGTGGAATGAGACGAGGGAATCTGTATGCTCAGATGGACGAGTATAAGAACAGCATTGTGCATTGGGTGTGGGAGCTTCACGGCAAGGGAAAGTTACTAGCTGCAGTGGATAGCAGGATAAGCAAGGAAATTAGAGAAGATCAAGCGGAAGATGTGCTTGTTCTGGGGTTGGCCTGTTGTCATCCAAACCCTCATTACAGGCCCTCTATGAGGACTGTAATGCAGGTTCTCACAGGGGAAGCGGCCCCGCCAGAGTTACCCAAGGAAAGACCTGCTTTTGTGTGGCCTGCCTTGCCTCCTTCATTCACACAAGATGTGGATAACTCTGTCACAGCAAGCCAACTCACTACCTTCTTACGAGACTTGGAGGTCACTGGCAGATGA 1986 0.4507 MHISWVIKSQLVAVIFSIIALIQVSCFSFNFLNFQPPDEDKLILSKNSKIYLDAIQVTPDIRGEIFDYSGRVFYRRPYKLWSKSKNQIAAFNTTFVLNLKPQTSPGGEGLAFILTADTNVPENSEGQWLGIVNATTNGTSQAAILAVEFDTRSNSVEDGPDNHLGVNINSINSMNYVPLTDLGINVSSGTNVTMRIQYAEDKLSVFGSMNGTADLKTLLISSPLNLSSYLPEEVFLGFSASTSNYTELNCVRAWEFNGTRIADDKQKLLWVWITVPSALIFIAGVVFLLLWQRKRRMEKPDDAYPRIEDQIQHSSMAPKKFRLGDIRKATGRFGPQNKLGEGGFGTVYKGLLEGKEIAVKRVSKNSRQGKQEFIAEVTIIGSLHHRNLVKLIGWCYESRELLLVYEFMPNGSLDKYLYDDEKFGCKDGSILSWGTRQSAIYGVAQALDYLHNGSEKRVLHRDIKASNILLDSDFSAKLGDFGLARTIQKRDETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCGMRRGNLYAQMDEYKNSIVHWVWELHGKGKLLAAVDSRISKEIREDQAEDVLVLGLACCHPNPHYRPSMRTVMQVLTGEAAPPELPKERPAFVWPALPPSFTQDVDNSVTASQLTTFLRDLEVTGR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1346 661 CDD lectin_legume_LecRK_Arcelin_ConA 27 259 IPR001220 GO:0030246
Dere02g1346 661 Gene3D - 25 270 - -
Dere02g1346 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Dere02g1346 661 FunFam Probable L-type lectin-domain containing receptor kinase S.5 26 265 - -
Dere02g1346 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 258 IPR013320 -
Dere02g1346 661 Pfam Legume lectin domain 28 266 IPR001220 GO:0030246
Dere02g1346 661 ProSitePatterns Protein kinases ATP-binding region signature. 339 360 IPR017441 GO:0005524
Dere02g1346 661 PANTHER - 59 621 - -
Dere02g1346 661 Gene3D Transferase(Phosphotransferase) domain 1 408 617 - -
Dere02g1346 661 SUPERFAMILY Protein kinase-like (PK-like) 317 631 IPR011009 -
Dere02g1346 661 CDD STKc_IRAK 339 613 - -
Dere02g1346 661 ProSiteProfiles Protein kinase domain profile. 333 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1346 661 FunFam Probable L-type lectin-domain containing receptor kinase S.5 318 407 - -
Dere02g1346 661 SMART serkin_6 333 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1346 661 ProSitePatterns Legume lectins beta-chain signature. 145 151 IPR019825 -
Dere02g1346 661 Pfam Protein kinase domain 336 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1346 661 Gene3D Phosphorylase Kinase; domain 1 307 407 - -
Dere02g1346 661 FunFam probable L-type lectin-domain containing receptor kinase S.5 408 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1346 Dere-ChrDere02 12970065 12972050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1346 67 625 Receptor kinase-like Gene Family AT5G10530 39.003 9.87e-118 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere02g1346 Pkinase 2.2e-50 CL0016