Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1329 ATGATGTGCTGCGGAGGAGTAGAGGAGGAGTACGGTGGCCCACCTCCGAACCAATACACTGCACCACCTGGAGGGGGTAATACGTATGGTGGCGGAAGAGGAGGAGAGAGAGGAGAACCAAGGGGCAATGTTGTCAAGACAGGCGCTCCACAGAAAGAATTACCAATTGAGGCACCCGCTATTTCTTTGGATGAGTTAAATAGTTTGACAAGCAACTTTGGTTCGAGTGCTTTGATTGGAGAAGGTTCCTATGGACGGGTTTTCCACGCAAAGTTGAGCAATGGTCTGGATGCAGCTATCAAAAAGCTGGATACCAGTTCTTCACCAGAACCAGACTCTGATTTTGCAGCACAGTTATCTACAGTATCAAGATTAAAGCATGAGCATTTTCTGGAGTTGATGGGATATTGTTTGGAGGCAAACAACAGAATTTTGGTTTATCAGTATGCAAGCCTGGGTTCTTTGCATGATGTATTACATGGAAGGAAAGGTGTACAAGGGGCTGAACCTGGTCCAGTACTAAGCTGGAACCAGAGAGTGAAAATTGCATTTGGTGCAGCGAAAGGCCTTGAGTTTCTTCATGAAAAGTGTCAGCCGTCCATAGTTCACCGTGACGTGAGATCTAGCAATGTCTTACTGTTTGATGACTTTGAGACCAAGATTGCCGATTTCAACTTGACGAATCAGAATTCTGACACAGCAGCTCGGCTTCATTCAACTAGAGTCTTGGGAACTTTTGGCTATCATGCTCCAGAGTATGCCATGACTGGGCAGATTACCCAGAAAAGCGATGTTTACAGTTTTGGAGTTGTGCTTTTAGAACTCTTGACAGGAAGAAAGCCAGTAGACCATACAATGCCCAAGGGACAGCAAAGTCTTGTAACTTGGGCAACTCCAAGGCTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAGCTAAATAGTGATTACCCACCTAAGGCAATTGCTAAGTTCGCAGCGGTTGCAGCACTTTGTGTTCAGTATGAAGCTGACTTCCGGCCAAATATGACGATCGTTGTTAAAGCTCTCCAGCCACTTCTCAATGCCAAGCCGGCTGGCCCAGAAACTAGTGCTTGA 1101 0.4605 MMCCGGVEEEYGGPPPNQYTAPPGGGNTYGGGRGGERGEPRGNVVKTGAPQKELPIEAPAISLDELNSLTSNFGSSALIGEGSYGRVFHAKLSNGLDAAIKKLDTSSSPEPDSDFAAQLSTVSRLKHEHFLELMGYCLEANNRILVYQYASLGSLHDVLHGRKGVQGAEPGPVLSWNQRVKIAFGAAKGLEFLHEKCQPSIVHRDVRSSNVLLFDDFETKIADFNLTNQNSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNSDYPPKAIAKFAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPAGPETSA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1329 366 FunFam probable protein kinase At2g41970 46 149 - -
Dere02g1329 366 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Dere02g1329 366 Gene3D Phosphorylase Kinase; domain 1 46 149 - -
Dere02g1329 366 SMART tyrkin_6 73 351 IPR020635 GO:0004713|GO:0006468
Dere02g1329 366 Pfam Protein tyrosine and serine/threonine kinase 78 351 IPR001245 GO:0004672|GO:0006468
Dere02g1329 366 ProSitePatterns Tyrosine protein kinases specific active-site signature. 201 213 IPR008266 GO:0004672|GO:0006468
Dere02g1329 366 FunFam PTI1-like tyrosine-protein kinase 3 151 360 - -
Dere02g1329 366 MobiDBLite consensus disorder prediction 1 47 - -
Dere02g1329 366 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 39 359 - -
Dere02g1329 366 SUPERFAMILY Protein kinase-like (PK-like) 54 351 IPR011009 -
Dere02g1329 366 ProSiteProfiles Protein kinase domain profile. 73 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1329 366 Gene3D Transferase(Phosphotransferase) domain 1 151 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1329 Dere-ChrDere02 12824866 12827275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1329 44 355 Strubbelig Receptor Gene Family AT4G22130 44.762 2.03e-86 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Dere02g1329 PK_Tyr_Ser-Thr 5e-45 CL0016