Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1312 ATGAGCTTGCGTCTTGCGACGTGGAAATCCTGTAACGCATGCTTTTCTCATACCCATTCGCTTATTACTACACGCGCCCTCTCCACTTTCGCCTTCCATTTACTTTTCGTCCCTTTTCACTCTGCACACTGTAAGCAGCTAGAGAAGGACGCCGGAGAATCGCCGTCTAAGGTTAGGGTTTGCCCTAATTGGGATATTGCTCCCCCGGTTCTGATTGAGCGAAGTAGCAAGATGGGTGTAAATTCCCTGCCATCGGAGTTGAGCAATGATCTTGATGAGCAGATCTCACAGCTCATGCAGTGCAAGCCACTTTCAGAGCAACAGGTTAGAGTTTTATGTGAGAAGGCAAAGGAGATTTTGATGGATGAAAGTAATGTCCAGCCTGTAAAGAGTCCTGTGACAATTTGTGGCGATATTCATGGACAGTTTCATGATCTTGCTGAGCTATTTCGAATAGGAGGGAAGTGTCCAGATACGAACTATTTGTTTATGGGAGATTATGTGGACCGGGGTTATTATTCAGTCGAAACTGTAACACTCCTTGTGGCATTGAAAGTGCGGTATCCTCAGCGGATTACTATTCTTCGAGGAAACCATGAAAGCCGTCAAATTACTCAAGTATATGGATTTTACGATGAATGCCTAAGAAAGTATGGCAATGCCAATGTTTGGAAGATCTTTACAGATCTTTTTGATTATTTTCCATTGACTGCATTGGTCGAATCGGAAATATTTTGTCTGCATGGTGGACTGTCACCATCAATTGAAACCCTTGATAATATAAGGAATTTTGATCGTGTTCAAGAGGTTCCTCATGAAGGGCCCATGTGTGATCTGTTATGGTCCGACCCAGATGACAGATGTGGCTGGGGAATTTCTCCTCGTGGTGCCGGGTATACTTTTGGCCAGGATATTTCTGAACAATTCAATCACACAAACAGCCTTAAGTTGATCGCTAGAGCTCATCAGCTAGTGATGGATGGATTTAACTGGGCTCATGAACAAAAGGTGGTCACCATATTTAGTGCGCCTAACTACTGTTATAGATGTGGGAACATGGCTTCCATATTGGAGGTTGATGATTGCAAGGGTCACACATTTATCCAGTTTGAACCGGCTCCTAGGAGAGGAGAACCGGATGTCACTCGCAGGACACCTGATTACTTCCTATAA 1173 0.4416 MSLRLATWKSCNACFSHTHSLITTRALSTFAFHLLFVPFHSAHCKQLEKDAGESPSKVRVCPNWDIAPPVLIERSSKMGVNSLPSELSNDLDEQISQLMQCKPLSEQQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNSLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1312 390 CDD MPP_PP2A_PP4_PP6 90 374 - -
Dere02g1312 390 PRINTS Serine/threonine phosphatase family signature 314 334 IPR006186 GO:0016787
Dere02g1312 390 PRINTS Serine/threonine phosphatase family signature 336 352 IPR006186 GO:0016787
Dere02g1312 390 PRINTS Serine/threonine phosphatase family signature 132 159 IPR006186 GO:0016787
Dere02g1312 390 PRINTS Serine/threonine phosphatase family signature 258 285 IPR006186 GO:0016787
Dere02g1312 390 PRINTS Serine/threonine phosphatase family signature 194 218 IPR006186 GO:0016787
Dere02g1312 390 PRINTS Serine/threonine phosphatase family signature 229 255 IPR006186 GO:0016787
Dere02g1312 390 PRINTS Serine/threonine phosphatase family signature 161 188 IPR006186 GO:0016787
Dere02g1312 390 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 89 390 IPR047129 GO:0004722
Dere02g1312 390 Gene3D - 84 390 IPR029052 -
Dere02g1312 390 SMART pp2a_7 104 374 IPR006186 GO:0016787
Dere02g1312 390 FunFam Serine/threonine-protein phosphatase 84 390 - -
Dere02g1312 390 Pfam Calcineurin-like phosphoesterase 132 323 IPR004843 GO:0016787
Dere02g1312 390 ProSitePatterns Serine/threonine specific protein phosphatases signature. 195 200 IPR006186 GO:0016787
Dere02g1312 390 SUPERFAMILY Metallo-dependent phosphatases 88 375 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1312 Dere-ChrDere02 12582102 12589900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1312 96 320 Calmodulin-binding Proteins AT5G63870 34.457 3.67e-32 121