Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1303 ATGGCTTCAAGATTCTGGACACAGGGCGGGAGTGACTCTGAGGAAGAGGAGAGTGACTTTGATGAGGACGTTGAGAATGTTGTGGGTGAATCTGCCAATCCAACTGTCAAAAGCAGATACTTGCAGAGTAATGACAGTGATAGTGATGACTCTGATGGCCAAAAGCGTGTTGTTAGGTCTGCAAAAGACAAGCGATTTGAGGAGATGTCATCTACTATTGACCAGATGAAGAATGCTATGAAGATTAATGACTGGGTGAGCTTGCAAGAGAGCTTTGATAAGATAAACAAACAACTGGAGAAAGTCATGCGTGTCACCGAATCTGAGAAGGTCCCTACTCTTTACATTAAGGCACTTGTGATGTTGGAAGACTTCCTGGCACAGGCTTTGGCAAATAAGGATGCCAAGAAGAAGATGAGTAGTAGCAATGCTAAAGCATTGAACTCAATGAAGCAGAAATTGAAGAAGAATAATAAGCAATATGAGGATTTGATCAATAAATATAGAGAAAACCCTGAGAGTGAGGAGGACAAAGATGAAGAAGAGGATGAGGATGAGGATGAAAGTGAGGAAGAGGTAATTGAGGAGCTTGATAAGATTCAAAAGTCAGATTCTGAAGATGGTGATCAAGAAGATGAGAAGTCAGATGCAATTGATACACCTTGGGACCAAAAGCTTAGCAAGAAAGACAGACTTATGGATAGGCAATTTATGAAAGACCCTAGTGAGATCACTTGGGACATGGTTAACAAGAAGTTCAAGGAGGTTGTGGCGGCTAGGGGCAGGAGGGGAACTGGAAGGTTTGAACAGGTCGAGCAGCTTACCTTCTTAACAAAAGTTGCTAAAACTCCTGCGCAAAAGCTGGAAATCTTTTTCAGTGTTGTTTCTGCTCAATTTGATGTTAATCCAGGTTTAAATGGGCATATGCCTATAAATGTGTGGAAGAAATGCTTACAGAACATGCTGGTCATCCTTGATATTCTAGTGCAGTACCCGAACATAGTTGTTGATGATACAGTGGAGCCTGATGAGAATGAAACTCAGAAGGGGCCTGACTATAATGGACCAATTCGGGTATGGGGGAACTTAGTTGCATTCCTAGAAAGAATAGATTCTGAGTTTTTCAAGAGCTTGCAATGCATTGATCCTCATACCCGTGAGTATGTTGAGAGACTTAGGGATGAACCCATGTTTCTGGCTCTTGCTCAGAATGTCCAGGACTATCTTGAAAGGGTTGGAGATTTCAAAGCTTCTTCCAAGGTAGCTCTTAGACGGGTTGAACTCATCTATTACAAACCACAAGAGGTTTATGATGCTATGAGAAAGTTGGCTGAACAGACACAGGACGGAGATAATGGAGAGGTGGATGATGAGTCTAAAGGGTTTGAGGAAACAAGGACTCCTGCTGCATTTGTTGTTACTCCTGAGCATGTTCCCCGAAAACCCACATTTCCAGAGAATAGCAGGACATTAATGGATATATTGGTTTCCCTGATATACAAGTATGGGGATGAGAGGACTAAGGCACGTGCAATGCTTTGTGATATATATCACCATGCTCTTCTGGATGAGTTCTCGACAGCCCGTGATCTTCTGCTTATGAGCCATTTGCAAGATAGTGTTCAGCATATGGACATATCAACACAAATACTTTTTAACAGGGCTATGTCACAGCTAGGTCTATGTGCTTTCCGGGTTGGATTGATTTCTGAAGCTCATTCCTGTCTCTCTGAACTTTATTCTGGTGGAAGGGTGAAGGAACTGCTTGCGCAGGGTGTCTCGCAAAGTCGCTATCATGAGAAGACTCCAGAACAGGAAAGGTTGGAAAGGAGACGCCAGATGCCATATCATATGCACATAAACCTTGAGCTCCTGGAGTCTGTGCATCTTATATGCGCTATGCTTCTGGAAGTCCCTAACATGGCAGCGAATGTCCATGATGCAAAGCGCAAGGTTATTAGTAAGACTTTCCGTCGCCTGCTTGAGGTTAGTGAGAAGCAAACATTTACAGGTCCACCTGAAAATGTCAGAGATCATGTCATGGCTGCGACAAGGGCCCTTAGCAAGGGAGACTTCCATAAGGGTTATGACATTATCAAGTCTTTGGATGTCTGGAAATTTGTTAGAAATCGTGACAATGTGCTTGAAATGCTTAAGGAAAAAATCAAGGAGGAGGCACTAAGGACCTATCTCTTTACCTTCTCTTCGTCCTATGATTCTTTGAGCCTGGAGCAGCTCATGAAAATGTTTGACCTCTCTGTTGCTCACACCCATAGCATTGTTAGTAGGATGATGATCAATGAGGAGCTCCATGCAAGCTGGGACCAGCCAACTGGGTGTATTATTTTCCAGGACGTTGAGCACTCTAGATTGCAGGCTCTGGCATTCCAGTTGACAGAGAAGTTATCTATCCTTGCAGAGAGTAATGAAAGAGCTATAGAGGCAAGGATAGGTGGTGGTGGAATGGATCTGCCTCTAAGGCGGCGAGATAGCCAGGACTATGCTGCAGCTGCTGCTGCAACAGCTACTGTAGGTGGTAGGTGGCAAGACTTGTCCCTTACTCAGACGAGGCAAGGCGGTGGTACTGGACGTGCAGGATATAGTATTGGTGGTGGAAGGCCATTGGCATTGAACCAAAACACTGGGAGTGGCTATTCAAGGGACCGGACAGGAAGAGGAACAGGTGGAGGCTATCAGAGTACAAGATATCAAGACTCCGCATATGGTGGCCCAGGGAGAACAACTCAGAGTGGTTCAGCACTGAGGGGAGCCCAGGTGGATGCACCTACACGTATGGTTAGCCTTAAGGGAGTCCGTGCTTAA 2823 0.4463 MASRFWTQGGSDSEEEESDFDEDVENVVGESANPTVKSRYLQSNDSDSDDSDGQKRVVRSAKDKRFEEMSSTIDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESEKVPTLYIKALVMLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEDLINKYRENPESEEDKDEEEDEDEDESEEEVIEELDKIQKSDSEDGDQEDEKSDAIDTPWDQKLSKKDRLMDRQFMKDPSEITWDMVNKKFKEVVAARGRRGTGRFEQVEQLTFLTKVAKTPAQKLEIFFSVVSAQFDVNPGLNGHMPINVWKKCLQNMLVILDILVQYPNIVVDDTVEPDENETQKGPDYNGPIRVWGNLVAFLERIDSEFFKSLQCIDPHTREYVERLRDEPMFLALAQNVQDYLERVGDFKASSKVALRRVELIYYKPQEVYDAMRKLAEQTQDGDNGEVDDESKGFEETRTPAAFVVTPEHVPRKPTFPENSRTLMDILVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDSVQHMDISTQILFNRAMSQLGLCAFRVGLISEAHSCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLESVHLICAMLLEVPNMAANVHDAKRKVISKTFRRLLEVSEKQTFTGPPENVRDHVMAATRALSKGDFHKGYDIIKSLDVWKFVRNRDNVLEMLKEKIKEEALRTYLFTFSSSYDSLSLEQLMKMFDLSVAHTHSIVSRMMINEELHASWDQPTGCIIFQDVEHSRLQALAFQLTEKLSILAESNERAIEARIGGGGMDLPLRRRDSQDYAAAAAATATVGGRWQDLSLTQTRQGGGTGRAGYSIGGGRPLALNQNTGSGYSRDRTGRGTGGGYQSTRYQDSAYGGPGRTTQSGSALRGAQVDAPTRMVSLKGVRA 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1303 940 MobiDBLite consensus disorder prediction 854 873 - -
Dere02g1303 940 MobiDBLite consensus disorder prediction 879 923 - -
Dere02g1303 940 Coils Coil 144 171 - -
Dere02g1303 940 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 717 805 IPR000717 -
Dere02g1303 940 MobiDBLite consensus disorder prediction 43 68 - -
Dere02g1303 940 Gene3D - 718 792 IPR036388 -
Dere02g1303 940 MobiDBLite consensus disorder prediction 134 225 - -
Dere02g1303 940 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 43 648 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Dere02g1303 940 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 2 863 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Dere02g1303 940 MobiDBLite consensus disorder prediction 1 68 - -
Dere02g1303 940 SUPERFAMILY "Winged helix" DNA-binding domain 713 787 IPR036390 -
Dere02g1303 940 MobiDBLite consensus disorder prediction 135 154 - -
Dere02g1303 940 MobiDBLite consensus disorder prediction 155 174 - -
Dere02g1303 940 MobiDBLite consensus disorder prediction 175 194 - -
Dere02g1303 940 MobiDBLite consensus disorder prediction 12 26 - -
Dere02g1303 940 ProSiteProfiles PCI domain profile. 616 788 IPR000717 -
Dere02g1303 940 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 935 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Dere02g1303 940 MobiDBLite consensus disorder prediction 879 927 - -
Dere02g1303 940 Pfam PCI domain 656 784 IPR000717 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1303 1 940 Eukaryotic Initiation Factors Gene Family AT3G56150 68.638 0.0 1230