Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1298 ATGGGCTACCTACCCGGGTTCGGCAATACGTCCCCGGACATTGTTGCCCGGCGAGAGCTTCGAAGCCGCCTTTTGTCTGAGTCTGCTCTCGAAGCACAAGTTCGTATTCGCGCCATGACTACTGCAGCGGCAGTTCCTTACGAAGATACTAAGAATCTAGATCCGACCCAGATCGAGGTGAAACTTTTCAATAGGTGGACCTTCGACGATGTTCAGGTTAATGACATCTCTCTGGCTGATTATATTGGAGTGGCAGCATCCAAGCATGCAACATATGTTCCTCATACTGCTGGTAGGTACTCAGTCAAGCGATTCAGGAAAGCCCAGTGTCCAATAGTTGAGAGACTTACTAATTCTCTCATGATGCACGGTAGAAATAATGGGAAGAAACTAATGGCTGTGAGAATTGTCAAACATGCAATGGAAATTATCCACCTGCTAACTGATCAGAACCCCATTCAAGTTATTGTTGATGCTGTGATTAACAGTGGTCCTCGTGAAGATGCAACTCGAATAGGATCTGCGGGAGTTGTTAGGAGACAAGCTGTGGATATCTCGCCCCTTCGTCGTGTTAATCAGGCCATTTATCTTCTAACTACTGGTGCACGTGAAGCTGCTTTCAGAAATATTAAGACAATTGCTGAATGCTTGGCTGATGAACTTATCAATGCAGCAAAGGGCTCATCCAACAGCTATGCTATCAAGAAAAAGGATGAGATTGAAAGAGTTGCAAAGGCAAATCGTTAA 747 0.4525 MGYLPGFGNTSPDIVARRELRSRLLSESALEAQVRIRAMTTAAAVPYEDTKNLDPTQIEVKLFNRWTFDDVQVNDISLADYIGVAASKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1298 248 Pfam Ribosomal protein S7p/S5e 102 248 IPR023798 -
Dere02g1298 248 NCBIfam 30S ribosomal protein S7 59 248 IPR005716 GO:0003735|GO:0006412|GO:0015935
Dere02g1298 248 Gene3D Ribosomal protein S7 domain 41 248 IPR036823 -
Dere02g1298 248 FunFam 40S ribosomal protein S5 43 248 - -
Dere02g1298 248 ProSitePatterns Ribosomal protein S7 signature. 114 140 IPR020606 GO:0003723|GO:0003735|GO:0006412
Dere02g1298 248 SUPERFAMILY Ribosomal protein S7 61 248 IPR036823 -
Dere02g1298 248 CDD uS7_Eukaryote 61 248 IPR005716 GO:0003735|GO:0006412|GO:0015935
Dere02g1298 248 PANTHER RIBOSOMAL PROTEIN S7 41 248 IPR000235 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1298 Dere-ChrDere02 12413712 12418291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1298 39 248 Cytoplasmic Ribosomal Protein Gene Family AT3G11940 87.143 9.22e-134 374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g1298 02 12413712 12418291 Dere02g1298 02 12413712 12418291 ECH