Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1290 ATGGGTTCTCTTCCACAAATAGTAGAGGACTGCCTGGGTTTCCTCCAGCTCTACAGTGATGGCTCCATATTCCGATCTGATGACATAGATTTCAAAGTTTCACTTGTTGAAGACAACTCTGTACTCTTCAAAGACTGCCTCTTCGACAAAAGATTCAATCTCTATCTTCGTCTCTTCAAACCAAAATCCTCCTCCCACAAGCTTCCTCTCATAATGTTCATCCATGGCGGAGGATTCTGTTTCGGCTCACGCGCCTGGCCCCACCTTCATAATTGCTGCGTTCGTATGGCTTCCGGGCTCCAAGCGGTCGTCTTGGCGCCCGACTACCGGCTGGCGCCGGAGCACCGGCTTCCGGCGGCGATGGACGATTCTGTGGAGGCGGTGAGGTGGGTACAGAGGCAGGCTCTGAGTAAGGACGTCGATGGCGGTGGGGATGCATGGTTGAATCGTGTCGTTGACTTTGACCGAGTGTTCATAGTGGGAGACTCTTCTGGCGGGAATATCGCACACCATTTGGCGGTTCGGTTTGGTTCCGGGTCCGGTGAAATGGATCCGGTTCGGGTACGAGGTTATGTGCTGTTGGCGCCATTTTTCGGTGGGGAGGTTAGAACCATGTCCGAGGAGTGCGCTCGCGAAGAAATGTTGAGCTTGGAGTTACTAGACAGATTTTGGAGGCTGTCAATACATGTAGGAGAGACTAGAGACCACCCATTGGCGAACCCATTCGGACCTGGAAGCCCTAATCTTGGACAAGTGAAGCTTGATCCTATATTGGTGATAGTTGGTGGCAATGAATTGCTGAAGGATAGAGCAGAAGATTATGCAAGAAGATTAAAAGAACTAGGGAAGAAGATTGATTACATTGAGTTTGAAGGAAGAGAACATGGATTTTTCACGCAAGATCCATACTCACTAGTTGCAGAAGAGGTCATGCAAATCCTCAAGCGATTCATACTTGAAAATTCCAGTTAG 972 0.4938 MGSLPQIVEDCLGFLQLYSDGSIFRSDDIDFKVSLVEDNSVLFKDCLFDKRFNLYLRLFKPKSSSHKLPLIMFIHGGGFCFGSRAWPHLHNCCVRMASGLQAVVLAPDYRLAPEHRLPAAMDDSVEAVRWVQRQALSKDVDGGGDAWLNRVVDFDRVFIVGDSSGGNIAHHLAVRFGSGSGEMDPVRVRGYVLLAPFFGGEVRTMSEECAREEMLSLELLDRFWRLSIHVGETRDHPLANPFGPGSPNLGQVKLDPILVIVGGNELLKDRAEDYARRLKELGKKIDYIEFEGREHGFFTQDPYSLVAEEVMQILKRFILENSS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1290 323 Coils Coil 264 284 - -
Dere02g1290 323 SUPERFAMILY alpha/beta-Hydrolases 5 318 IPR029058 -
Dere02g1290 323 PANTHER ARYLACETAMIDE DEACETYLASE 12 298 - -
Dere02g1290 323 Pfam alpha/beta hydrolase fold 71 298 IPR013094 GO:0016787
Dere02g1290 323 Gene3D alpha/beta hydrolase 18 322 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1290 Dere-ChrDere02 12330975 12333527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1290 7 317 Carbohydrate Esterase AT5G16080 32.812 5.87e-57 186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3329 01 47992259 47995561 Dere02g1290 02 12330975 12333527 CCT
Dere02g1290 02 12330975 12333527 Dere02g1290 02 12330975 12333527 ECH