Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1282 ATGGGCAACAACTGTGTGGGACCAAAGCTTGGTGGGAATGGGTTCATGCAATCTGTCACGGCCTCTATTTGGAAAACCCGGCCGCCGGAGGGCAGGCTTCCGCCGCCTAACGCCGTCGCGGAAAATGCAGGTCCTGATTCATCCAAAGATTCTGATGCTCCCAAGCCAGTTCAAAGTACACCGCCTGAAGTGATGAAGATTCCCAGTGTTGAAAGAAAACCGCCGGAACCCGAAAAGCCTGTTGAGCCGGAGGTCAAAGGACCTGTATCTAATACTGCCGATGCCGGGAAAGCCGAAAAGCCTGTTGAGCCGGAGGTCAAAGGACCTGTATCTAATACTGCTGATGCCGGGAAAGCCGAAAAGCCTGTTAAGCCGGAGGGGGTCAATGAACCTACTCCTAGAAATACTACTGATGCCGGGGAAGCTAAGAAACCCGCTCATATTAAAAGGGTATCGAGTGTGGGACTTCGAATAGAATCGGTGTTAGGGAAGAAAACTGGGAATTTGAAGGATATTTATAGTCTGGGGCGGAAGCTTGGAGAAGGGCAGTTCGGGACAACATACTACTGCTTAGAGAAGGCAACTGGTAAAGAGTTTGCTTGTAAATCAATTGCCAAGAGAAAATTGACCACACAAGAGGATGTAGACGATGTTAGAAGGGAGATTCAGATAATGCACCATTTGGCAGGTCACCCCAATGTGATTCAAATAGTTGGTGCTTATGAGGACGCTGTAGCTGTCTATGTTGTTATGGAACTTTGTGCTGGTGGGGAGCTTTTTGACAGGATAATTCAGAGAGGGCACTACACTGAGAAAAAGGCAGCCGAGCTTGCAAGGTTAATAGTTCGTGTTGTGGAGGCATGCCATTCTATGGGGGTCATGCATCGGGACTTGAAGCCAGAGAACTTTCTGTTCGTCAACCAAGAGGAAGAGGCACCACTTAAGACAATAGATTTCGGGCTCTCAGTGTTCTTTAGACCAGGTGAAACATTTACCGATGTGGTTGGGAGCCCCTACTACGTGGCCCCTGAAGTTTTGCGGAAGTTCTATGGTCAAGAATGTGATATCTGGAGTGCAGGGGTGATCATTTATATTTTACTGAGTGGGGTTCCCCCATTTTGGGATGAAACGGAGCAAGGCATATTTGAGCAAGTTTTAAAAGGGGAGCTTGACTTTGTCTCTGAACCATGGCCTAACATATCTGCAAGTGCAAAGGATCTTCTTCGAAAAATGCTTGTCAGAGACCCTAAGAAGCGACTAACAGCGCATGAAGTTCTTAGCCACCCTTGGGTCCAGGTTGAAGGTGTTGCTCTCGATAAACCTCTTGATTCTGCCGTCCTAACTCGTTTGAAGAAATTCTCTGCCATGAACAAGCTCAAAAAAATGGCCATCCGAGTAATTGCTGAAAGTCTGTCAGAAGATGAAATAGCAGGGTTGAAAGAAATGTTCAAGATGATAGACACCGATAACAGTGGACATATTACTCTTGAGGAACTGAAAGTTGGTTTGGAGAGAGTGGGTGCTCTTCTCAAGGATTCTGAAATTCATTGGTTAATGCAATCGGCAGACGTTGATAATAGTGGTACAATAGACTATGGTGAATTCATAGCAGCTATGCTTCATCTAAACAAGGTCCAGAAGGAGGATCATCTATATGCAGCCTTCTCCTACTTTGATAAAGATGGTAGTGGGTACATTACGCGAGATGAGCTCCACCAAGCCTGTCAACAGTTTGGTCTGGAAGATGTTCAATTAGATGATCTAATACGTGAAGTTGACCAGGATAATGACGGACGCATTGATTACAGTGAGTTTGTTGCAATGATGCAAGACACTGGTATGAGCAAAAATGGACTACAAAACAGCACGAGTAAAATTGCGGATACCATCAAGCGTTAA 1899 0.4587 MGNNCVGPKLGGNGFMQSVTASIWKTRPPEGRLPPPNAVAENAGPDSSKDSDAPKPVQSTPPEVMKIPSVERKPPEPEKPVEPEVKGPVSNTADAGKAEKPVEPEVKGPVSNTADAGKAEKPVKPEGVNEPTPRNTTDAGEAKKPAHIKRVSSVGLRIESVLGKKTGNLKDIYSLGRKLGEGQFGTTYYCLEKATGKEFACKSIAKRKLTTQEDVDDVRREIQIMHHLAGHPNVIQIVGAYEDAVAVYVVMELCAGGELFDRIIQRGHYTEKKAAELARLIVRVVEACHSMGVMHRDLKPENFLFVNQEEEAPLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKFYGQECDIWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFVSEPWPNISASAKDLLRKMLVRDPKKRLTAHEVLSHPWVQVEGVALDKPLDSAVLTRLKKFSAMNKLKKMAIRVIAESLSEDEIAGLKEMFKMIDTDNSGHITLEELKVGLERVGALLKDSEIHWLMQSADVDNSGTIDYGEFIAAMLHLNKVQKEDHLYAAFSYFDKDGSGYITRDELHQACQQFGLEDVQLDDLIREVDQDNDGRIDYSEFVAMMQDTGMSKNGLQNSTSKIADTIKR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1282 632 ProSitePatterns EF-hand calcium-binding domain. 487 499 IPR018247 -
Dere02g1282 632 FunFam Calcium-dependent protein kinase 1 439 613 - -
Dere02g1282 632 Gene3D Phosphorylase Kinase; domain 1 175 258 - -
Dere02g1282 632 PANTHER SERINE/THREONINE-PROTEIN KINASE 165 605 - -
Dere02g1282 632 SUPERFAMILY EF-hand 471 613 IPR011992 -
Dere02g1282 632 CDD EFh 479 539 IPR002048 GO:0005509
Dere02g1282 632 SMART serkin_6 173 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1282 632 MobiDBLite consensus disorder prediction 69 83 - -
Dere02g1282 632 FunFam Calcium-dependent protein kinase SK5 259 443 - -
Dere02g1282 632 SMART efh_1 478 506 IPR002048 GO:0005509
Dere02g1282 632 SMART efh_1 550 578 IPR002048 GO:0005509
Dere02g1282 632 SMART efh_1 584 612 IPR002048 GO:0005509
Dere02g1282 632 SMART efh_1 514 542 IPR002048 GO:0005509
Dere02g1282 632 SUPERFAMILY Protein kinase-like (PK-like) 173 432 IPR011009 -
Dere02g1282 632 ProSiteProfiles Protein kinase domain profile. 173 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1282 632 FunFam Calcium-dependent protein kinase 1 175 258 - -
Dere02g1282 632 ProSiteProfiles EF-hand calcium-binding domain profile. 474 509 IPR002048 GO:0005509
Dere02g1282 632 Pfam EF-hand domain pair 479 539 IPR002048 GO:0005509
Dere02g1282 632 Pfam EF-hand domain pair 549 610 IPR002048 GO:0005509
Dere02g1282 632 MobiDBLite consensus disorder prediction 21 146 - -
Dere02g1282 632 ProSitePatterns EF-hand calcium-binding domain. 559 571 IPR018247 -
Dere02g1282 632 Gene3D - 456 615 - -
Dere02g1282 632 ProSiteProfiles EF-hand calcium-binding domain profile. 510 545 IPR002048 GO:0005509
Dere02g1282 632 ProSitePatterns EF-hand calcium-binding domain. 593 605 IPR018247 -
Dere02g1282 632 ProSitePatterns Protein kinases ATP-binding region signature. 179 206 IPR017441 GO:0005524
Dere02g1282 632 ProSitePatterns EF-hand calcium-binding domain. 523 535 IPR018247 -
Dere02g1282 632 CDD STKc_CAMK 173 430 - -
Dere02g1282 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Dere02g1282 632 Pfam Protein kinase domain 173 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1282 632 ProSiteProfiles EF-hand calcium-binding domain profile. 546 581 IPR002048 GO:0005509
Dere02g1282 632 Gene3D Transferase(Phosphotransferase) domain 1 259 455 - -
Dere02g1282 632 ProSiteProfiles EF-hand calcium-binding domain profile. 584 615 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1282 Dere-ChrDere02 12253851 12257874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1282 1 622 EF-hand Containing Proteins AT2G38910 70.144 0.0 881
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dere02g1282 Pkinase 1.6e-75 CL0016