Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1280 ATGGCGAAAGCAAATGCCTGTGGGCTAGCAAGAACGAAATCGGATCAGCTGGTGGAGTCGGTGGCGGCGGCTCTGAAGTCGCCATCGTCAAGTGAGTCAATGGGAATGGTGGAGGGAGGGAGTAGCGCAACGCCATCGAGGAAGTCGAGCCGGCGTATGACGGGGGTGTCGCCGGGGAGAAGCGGAGGAGGGAAGAACACGCACATAAGGAAGTCGAGGAGTGCTCAGTTGAAGTATGAGCTGGATGAGGTCAGCAGTGGGGCTGCTCTGAGCCGAGCTTCCAGCGCCAGCCTGGGGCTCTCTTTCTCCTTCACTGGCTTCACTGTTCCTCCCGATGAAATCGCCGACTCCAAGCCCTTCAGCGACGACGATATTCCGGAGGATATTGAAGCTGGAATTCATAAGCCAAAGCTTCAAACAGAGCCCACTCTGCCAATTTATTTAAAGTTCAAGGATGTGAGTTACAAGGTGGTGATCAGAGGCATGGCAACAACGGAGGAGAAGGAGATATTGAATGGGATCACTGGTTCTGTAAATCCAGGAGAAGTTTTGGCATTGATGGGTCCTTCAGGAAGTGGAAAGACAACTCTCCTAAATCTTCTTGGAGGCAGGCTAAGTCAGCCCACCATGAATGGCTCCATCACTTACAATGATCAACAATATTCCAAGTTCCTGAAGAGCAGGATAGGATTCGTGACTCAAGATGACGTTCTGTTTCCTCATCTCACTGTGAAGGAAACACTGACATACGCAGCCCGCCTGAGATTGCCGAAGACAACCACGAAGGAGCAAAAGGAAAAACGAGCTTTAGATGTCATTAATGAGCTTGGCTTGGAGAGGTGCCAAGACACTATGATAGGCGGTTCCTTTGTTCGTGGAGTATCTGGTGGAGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTGTTTCTTGACGAACCAACGTCTGGTTTGGACTCTACAACAGCCTTGAGGATCGTTCAGATGCTACAAGACATGGCAGAGGCTGGTAAAACAGTAGTGACAACAATCCACCAACCGTCTAGCAGACTCTTCCACAAATTCGATAAGTTGATCCTTCTAGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCAGAAGCAATGATATACTTCCAATCTATAGGATGCTCACCTCTTATTGCCATGAATCCAGCAGAATTTTTGCTTGACCTTGCCAATGGAAACATCAATGATGTATCTGTGCCATCAGAGTTAGAGGATAGAGTGCATATGGGAAATGCAGACTCTGAAACCCGGAATGGGAAACCACCACCAACACTTGTACATGAGTATTTGGTGGAGGCGTATGAGACCCGAGTTGCAGAAACGGAGAAGAAAAAACTATTGGATCCCATCCCTCTCGATGAAGAAGTGAAGTCCAAAGTTTCTTCTCCTAAAAGACAGTGGGGAGCGAGCTGGTGTGAGCAATATTCAATACTGTTCTGGAGGGGAATTAAGGAACGAAGACACGACTATTTTAGCTGGTTGAGAATCACCCAAGTTCTGTCCACCGCAATCATCCTAGGATTACTTTGGTGGCAATCAGATGCTTCCAATCCAAAGGGTCTCCAAGATCAGGCAGGGCTGCTTTTCTTTATTGCTGTGTTTTGGGGATTCTTTCCTGTGTTCACTGCTATATTTACCTTTCCTCAAGAGCGAGCCATGTTGAATAAGGAACGTGCAGCTGATATGTACAGACTAAGTGCATACTTCGTGGCTAGGACTACAAGTGACCTTCCATTGGATTTGATATTACCAGTACTTTTCCTCCTTCTTGTTTATTTCATGGCTGGATTGAGAATGAGTGCAAGCCCCTTTTTCCTCAGCATTCTTACTGTTTTCCTCTGCATCGTGGCAGCTCAGGGACTTGGACTTGCCATTGGAGCTACCCTAATGGACTTGAAAAGAGCAACAACACTGGCTTCAGTTACTGTGATGACATTTATGCTGGCTGGAGGATTCTTTGTGAAGAAAGTCCCTATATTTATATCTTGGATTCGATACATGTCATTCAATTACCACACGTATAAACTACTACTGAAGGTGCAATATGAGCATATGACGCCGCCAAGCATAAATGGAATGAGAATTGACAGTGGATGGACAGAAGTGGCTGCTCTCATAGCCATGGTTTTTGGTTACCGTTTCTTGGCTTACCTTTCTTTGAGACGAATGAAACTCCAATGA 2229 0.4648 MAKANACGLARTKSDQLVESVAAALKSPSSSESMGMVEGGSSATPSRKSSRRMTGVSPGRSGGGKNTHIRKSRSAQLKYELDEVSSGAALSRASSASLGLSFSFTGFTVPPDEIADSKPFSDDDIPEDIEAGIHKPKLQTEPTLPIYLKFKDVSYKVVIRGMATTEEKEILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLSQPTMNGSITYNDQQYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTTTKEQKEKRALDVINELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDMAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMIYFQSIGCSPLIAMNPAEFLLDLANGNINDVSVPSELEDRVHMGNADSETRNGKPPPTLVHEYLVEAYETRVAETEKKKLLDPIPLDEEVKSKVSSPKRQWGASWCEQYSILFWRGIKERRHDYFSWLRITQVLSTAIILGLLWWQSDASNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFVARTTSDLPLDLILPVLFLLLVYFMAGLRMSASPFFLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKKVPIFISWIRYMSFNYHTYKLLLKVQYEHMTPPSINGMRIDSGWTEVAALIAMVFGYRFLAYLSLRRMKLQ 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1280 742 MobiDBLite consensus disorder prediction 25 56 - -
Dere02g1280 742 MobiDBLite consensus disorder prediction 25 73 - -
Dere02g1280 742 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 97 733 - -
Dere02g1280 742 ProSitePatterns ABC transporters family signature. 294 308 IPR017871 GO:0005524|GO:0016887
Dere02g1280 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 382 IPR027417 -
Dere02g1280 742 SMART AAA_5 180 371 IPR003593 GO:0016887
Dere02g1280 742 Pfam ABC transporter 171 322 IPR003439 GO:0005524
Dere02g1280 742 Pfam ABC-2 type transporter 489 698 IPR013525 GO:0016020|GO:0140359
Dere02g1280 742 CDD ABCG_EPDR 145 376 - -
Dere02g1280 742 Pfam ABC-2 type transporter 351 411 IPR043926 GO:0140359
Dere02g1280 742 FunFam ABC transporter G family member 22 158 388 - -
Dere02g1280 742 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 148 394 IPR003439 GO:0005524
Dere02g1280 742 Gene3D - 147 387 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1280 Dere-ChrDere02 12241342 12247711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1280 114 408 Calmodulin-binding Proteins AT2G36910 29.043 1.11e-16 82.8