Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1266 ATGAACAACAACGCCACTGATAATTCTTCTGGATTCCTAGGATCCAACAACATAAGTGGATTCGGGTATGGCATAGGAATATCAAGTGGGATTCTGCTGCTCATCACAACCATCACGCTCACTTCCTATTTCTGCACCAGAACTCAGTCACCACCATCCACTCCCGCTGCATCTGCTGCTCAGAGAAATGCCCCAACATCCCTCGAACCACAGCACACAGTAGTCGATATAGGGCTAGATGAAGCCACCATTCTGAGTTACCCCAAACTGCTGTATTCTGAGGCCAAGCTGCAGAAGTCAGATTCCATAGCTACATGCTGTTCCATATGCCTAGGAGATTATAAAAGCAGGGATATGCTTCGAGAGCTACCTGATTGTGGACATGTGTTCCACCTCAAGTGCATCGACCCATGGCTGAGACTGCATCCAACATGTCCTCTCTGCAGAACATCTCCTATCCCAACACCACTCTCAACACCTCTCGCCGAGGTGGTTCCGTTGGCCGCCATGCGGGTATCATAA 522 0.4923 MNNNATDNSSGFLGSNNISGFGYGIGISSGILLLITTITLTSYFCTRTQSPPSTPAASAAQRNAPTSLEPQHTVVDIGLDEATILSYPKLLYSEAKLQKSDSIATCCSICLGDYKSRDMLRELPDCGHVFHLKCIDPWLRLHPTCPLCRTSPIPTPLSTPLAEVVPLAAMRVS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1266 173 SUPERFAMILY RING/U-box 88 154 - -
Dere02g1266 173 CDD RING-H2_EL5-like 106 149 - -
Dere02g1266 173 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 163 IPR045899 -
Dere02g1266 173 SMART ring_2 107 148 IPR001841 -
Dere02g1266 173 Pfam Ring finger domain 107 149 IPR001841 -
Dere02g1266 173 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 153 IPR013083 -
Dere02g1266 173 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1266 Dere-ChrDere02 12149039 12149560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1266 10 169 C3H Transcription Factor Family AT2G35910 61.250 3.53e-57 177