Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1246 ATGGGGATACCACAAGCAATGGATTTTCTCAAGGACAGAGCAGCGTTCGTGAAGGATTCACTGCATAAGAGCCAGACCATTACCGACAACATGGTCGCCATTCTTGGTTCTTTTGATCACCGCCTCTCTGCCCTTGAGACCGCTATGCGTCCAACTCAGATAAAAACGCATTCGATTCGAAGGGCGCATGAAAATATTGACAAAACACTAAAAACTGCTGAGTTCATTTTGGTGCAGTTCGATCTGACTCGTAAGGCGGAGGCAAAAATATTAAGAGGGCCACACGAAGATCTTGAAAGCTATTTAGAAGCAATTGATCAGCTGAGATCCATTATTAATTTCTTCAGCAACTATAAGAATATGAAAAATACTGATGGTGTCCTCAATCATGCGAACAACTTGCTTTCTAAAGCTATCTCAAAGTTGGAAGAAGAGTTCAGAAATCTCTTGACAAATTACAGCAAGCCTGTGGAACCTGATCGCCTTTTTGACTGCCTGCCAAACTCTCTACGGCCATCAACTTCTGGGCAGCAAGGTGATGGTGGTGGCAAACATCATTCTGAAAGCCAGAAAAATCCTCTGGAGACTCCCATTTTTACACTTCCGACTCTCATTCCACCCAGAGTTCTGCCTTTGCTACATGATTTAGCACTACAAATGGTTCAAGCTGGCCATCAGCAACAGCTATTTCGAATTTACAGGGACACTCGTGCAGCAGTCGTAGAACAGAGTCTTAGGAAGTTAGGTGTAGAGAGGCTTAGCAAAGATGATGTTCAAAAAATGCAGTGGGAGGTTTTGGAGGCTAAGATTGGGAACTGGATTCATTACATGCGGATTGCTGTCAAATTGCTTTTCGCTGGGGAAAAGAAAATCTGTGATCAAATATTTGAGGGGGTTGAGTCTTTGAGATCCCAATGTTTCGCTGAAGTCACTGCAAACAGTGTGGCAATGCTTCTTAGTTTTGGAGAGGCTATTGCTAAAAGCAAGAGATCTCCAGAAAAATTATTTGTTCTTCTTGATATGTATGAGATAATGAGAGAACTTCAACCAGAGATAGAGACAATTTTTGGAAGCAAAGCTTGCATTGAAATGCGGGATACTGCATTGAGTTTGGCCAAGCGACTAGCTCAGACAGCCCAAGAAACCTTTGGTGACTTTGAGGAAGCAGTTGAAAAAGATGCCACTAAGACTACTGTACTAGATGGAACTGTCCATCCTCTAACTAGCTACGTTATCAATTACGTGAAATTTCTTTATGATTATCAATCAACTCTGAAACAACTTTTTCAAGAGTTTGATTCTAGTGATCCAGACGAGCAGTTAGCATCTGTAACTACAAGAATTATGCAGGCTCTTCAAAACAATTTGGATGGAAAATCAAAACAGTATAAAGATCCAGCATTGACCCAGTTGTTCCTTATGAACAATATCCACTATATAGTCAGATCTGTGAGAAGGTCAGAGGCAAAGGAAATGTTGGGGGATGACTGGGTGCAAATACACAGAAGAATTGTGCAGCAGCATGCAAATCAGTATAAAAGGATCTCTTGGGCAAAGATATTGCAGTGCCTCACTGTCCAAGGAGCGAATTCATCAGGTGGTGGAGATAGCAATAGTGGAATTTCTAGAGCTGCGGTTAAAGATAGGTTTAAGACCTTTAATATTCAATTTGAGGAGATTCATCAAAGACAATCTCAATGGACAGTTCCTGATAGCGAGTTGCGTGAATCTCTAAGGCTGGCTGTTGCTGAAGTCCTTTTGCCTGCCTATAGATCTTTCCTTAAACGTTTTGGGCCTATGATAGAGAATGGCAAAAATCCTCAGAAGTACATAAGATACTCTCCCGAGAACCTTGAGCAAATGCTGGGTGAATTTTTCGAAAGCAAGACATGGAATGAACAAAGGCGGTGA 1911 0.4171 MGIPQAMDFLKDRAAFVKDSLHKSQTITDNMVAILGSFDHRLSALETAMRPTQIKTHSIRRAHENIDKTLKTAEFILVQFDLTRKAEAKILRGPHEDLESYLEAIDQLRSIINFFSNYKNMKNTDGVLNHANNLLSKAISKLEEEFRNLLTNYSKPVEPDRLFDCLPNSLRPSTSGQQGDGGGKHHSESQKNPLETPIFTLPTLIPPRVLPLLHDLALQMVQAGHQQQLFRIYRDTRAAVVEQSLRKLGVERLSKDDVQKMQWEVLEAKIGNWIHYMRIAVKLLFAGEKKICDQIFEGVESLRSQCFAEVTANSVAMLLSFGEAIAKSKRSPEKLFVLLDMYEIMRELQPEIETIFGSKACIEMRDTALSLAKRLAQTAQETFGDFEEAVEKDATKTTVLDGTVHPLTSYVINYVKFLYDYQSTLKQLFQEFDSSDPDEQLASVTTRIMQALQNNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKEMLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQGANSSGGGDSNSGISRAAVKDRFKTFNIQFEEIHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPMIENGKNPQKYIRYSPENLEQMLGEFFESKTWNEQRR 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1246 636 SUPERFAMILY Cullin repeat-like 79 627 IPR016159 -
Dere02g1246 636 PANTHER EXOCYST COMPLEX PROTEIN EXO70 57 627 IPR004140 GO:0000145|GO:0006887
Dere02g1246 636 MobiDBLite consensus disorder prediction 168 183 - -
Dere02g1246 636 Coils Coil 132 152 - -
Dere02g1246 636 Gene3D Exocyst complex component Exo70 75 178 - -
Dere02g1246 636 Gene3D Exocyst complex component Exo70 182 636 - -
Dere02g1246 636 MobiDBLite consensus disorder prediction 164 193 - -
Dere02g1246 636 Pfam Exo70 exocyst complex subunit 272 623 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1246 Dere-ChrDere02 11918082 11923762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1246 1 636 EXO70 exocyst subunit family AT5G52340 81.319 0.0 1065
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g1246 02 11918082 11923762 Dere02g1246 02 11918082 11923762 ECH