Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1242 ATGGCCGAGAAAAATCCCCAATTGAACGGAGCCTACTATGGCCCCTCCGTCCCCCCACCCAAGTCGTACCACCGGCCCGGCCGTGGCGGTGGCTGCGACTGCTGCTGCGGCTGTATATTCAGCCTCATCTGCAAACTCGTCATCACCGTCATCGTCATCGTGGGTATAGCCGCCCTTGTGTTCTGGCTCATAGTTCGACCAAACAAGGTGAAATTCCACGTCACCGATGCCACCCTCACCCAATTCACCTACACCAACAACACCCTCCACTACGATCTTGCTCTCAACATCACCATCCGCAACCCCAACAGGAGGCTGGGTGTCTACTACGACTCCATCGAAGCCAGGGCACTGTACCAGGATGCCAGGTTCGATTCCGAGAATCTCACGCCTTTCTACATGGGCCACAAGACCACCCATTATTTGAACACAGAGTTCAAAGGTCAGCGAGTGATATCCCTGGGTGCCGACCAGGCTTCGGAATACAATAAGGAGAAAAGCTCTGGGCTTTACGATATCGATGTGAAGTTGTATCTCAGGATTAGGTTCAAGTTGGGGGTGTTCAAGACCGGCAAGTTCAAGCCCAAGATTGACTGTGAACTCAAGGTTCCCTTGAGAGCCAACGGAACCTTGTCGTCGGGGGTATTTGAGACTACGGAGTGCGACTTGGATTACTGA 678 0.5324 MAEKNPQLNGAYYGPSVPPPKSYHRPGRGGGCDCCCGCIFSLICKLVITVIVIVGIAALVFWLIVRPNKVKFHVTDATLTQFTYTNNTLHYDLALNITIRNPNRRLGVYYDSIEARALYQDARFDSENLTPFYMGHKTTHYLNTEFKGQRVISLGADQASEYNKEKSSGLYDIDVKLYLRIRFKLGVFKTGKFKPKIDCELKVPLRANGTLSSGVFETTECDLDY 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1242 225 PANTHER OS05G0367900 PROTEIN 33 208 IPR044839 GO:0098542
Dere02g1242 225 Pfam Late embryogenesis abundant protein 96 197 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1242 Dere-ChrDere02 11897758 11898435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1242 64 214 SNARE and Associated Proteins AT1G32270 37.500 8.18e-29 108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g1242 02 11897758 11898435 Dere02g1242 02 11897758 11898435 ECH