LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere02g1240	ATGCCCACCAAAGCATTCATCTATCTTCTATCCTTTTTGCTTACTTCGGTTCTTGGATTGGATACCAAGTCTGCTGCTACTCTTTCCAAAGGTATCATAATGAGGGCATCGACATTGCCGGTTTGGTATAATGTGGGTGTGGGAGTGCCCATGTTCGTGCATGGAATCACAGTTGGTGTTGCCCTCAGCGTTATCTTCCCCTATTGGCTCATCACTGTCCTTGTCATTGGTCTCTTCTTAGCAACCTCCTCTTGTGAAGATGTTGTAAATGAGGTAGAATTCCACCAACAACAAAATGCAGACTCTGCACATGAAAACCACCCACCTAGTATCGAAAGCAGTGAGCTAAGCAATGATTTGGAACAATTGAACAGCTGTGAATTTAATGTTTTTCATGTTGAAGTTTGTACCTCAGAGCATGAAGAGCAAGTTGTTTCAGTTGTCTCGACAGAAGGTAATATTCATGGATTTCAAGGTCATAAGATGTGTGAGCCACACAAGGCTGATGAGACCAATGAAAACAGAAACTTAAGTTCAGAGACTGATGATGGAAGCATCAGCAGAGTGACACAGAATGAATTGATTGATGTGCATGCAGGGAAAATCGGTGCTGTTCAAGACCAAGAAGTTATGGGAAAAAATGAAGGTGAAGCAAATACGTTCCACGGCATAAGCTGCACAGGGCGCGAAGTGCAGAAAACAAACAAGAATTGGGGAAAAGAATTGAGGGACGAGATACCTGTCAAGAATGATGAGCCACTGAGGAGGTTCAACCTGCAAGGGCCAAACTTTCTGCCTTCGATACCTAATCAAAAACCAGAAAAGGTTATTCTCAAACAGCATATGATAAATGAAAGAAAAAGTGCAGAGGAATGGAAGTTTGATGACGCACTCTCAAAAGCTGTCACTAAACTTGCTCCAGAGAGGAAAAGTAAGGTGGCACTGATGGTTGAAGCTTTTGAAACAGCAATGCCAATACCCAAATGCCAAGCTCATATGAGAAACAGATCAGCCTTTGCTCATGCAAGAAACTTGAAACCGATGGATGTTTCTGAGGCAAAGATAAAAGGTCAGCAACTTCAAGTGCCATTTTATGATCAACAAAGGGAAGATGAAGGCGCCATCCGTGTGGAGCACCGCAAGAACATCTGA	1152	0.4288	MPTKAFIYLLSFLLTSVLGLDTKSAATLSKGIIMRASTLPVWYNVGVGVPMFVHGITVGVALSVIFPYWLITVLVIGLFLATSSCEDVVNEVEFHQQQNADSAHENHPPSIESSELSNDLEQLNSCEFNVFHVEVCTSEHEEQVVSVVSTEGNIHGFQGHKMCEPHKADETNENRNLSSETDDGSISRVTQNELIDVHAGKIGAVQDQEVMGKNEGEANTFHGISCTGREVQKTNKNWGKELRDEIPVKNDEPLRRFNLQGPNFLPSIPNQKPEKVILKQHMINERKSAEEWKFDDALSKAVTKLAPERKSKVALMVEAFETAMPIPKCQAHMRNRSAFAHARNLKPMDVSEAKIKGQQLQVPFYDQQREDEGAIRVEHRKNI	383

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere02g1240	383	PANTHER	CALMODULIN-BINDING PROTEIN-RELATED	148	325	IPR044681	GO:0005516
	Dere02g1240	383	MobiDBLite	consensus disorder prediction	160	177	-	-
	Dere02g1240	383	Pfam	Plant calmodulin-binding domain	244	324	IPR012417	GO:0005516
	Dere02g1240	383	MobiDBLite	consensus disorder prediction	158	185	-	-
	Dere02g1240	383	SMART	CaM_binding_2	214	325	IPR012417	GO:0005516

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere02g1240	Dere-ChrDere02	11884754	11886276	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere02g1240	247	325	Calmodulin-binding Proteins	AT2G38800	55.696	1.90e-21	94.4