Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1230 ATGTCTAACTCCAGAAAGAAGCTTCTTCTAAGCTCTGTTTCCGTCAAACTAGGCTGTGGCAGCTGCAGGAGACCAAAGCTTTCTCACATATTCCACCCAAAGCCAAAACCCAAGAACCCCTTTTACCACAAACACAAACTTTACAGTCTTTCATCTTCGTGCCAATACGACTCTGCCACCCCCACTACCACCACCACCGCCACCGCCACCACCACCACCACCAACACCACATTCTCTCCCTACATTGACTCCTCGCAGTTTTCTGACTCTGACTACTACGCGAATGCGTCGAGGACCGTCGGAGGTTTCGGCAGAGTTGGCGGCGAAGGCGTGGCGGTGGAGAAGGATTCCGACGACCCTTATCTGGATTTTAGGCACTCCATGCTTCAAATGATATTGGAGAACGAGATATACTCCAAGGATGATCTTCGGGAGCTTCTCAATTGTTTCCTTCAGCTCAATTCTCCATACCACCATGGGGTTATAGTCAGAGCTTTCACTGAGATCTGGAATGGGGTCTTCTCCGTGAGGTCATCCAATTCACCCAGATTTCACTTCAGTCGTAAGTCACGTGACTTCTGA 582 0.4966 MSNSRKKLLLSSVSVKLGCGSCRRPKLSHIFHPKPKPKNPFYHKHKLYSLSSSCQYDSATPTTTTTATATTTTTNTTFSPYIDSSQFSDSDYYANASRTVGGFGRVGGEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSPYHHGVIVRAFTEIWNGVFSVRSSNSPRFHFSRKSRDF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1230 193 ProSiteProfiles OVATE domain profile. 113 172 IPR006458 -
Dere02g1230 193 NCBIfam uncharacterized plant-specific domain TIGR01568 111 171 IPR006458 -
Dere02g1230 193 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 54 175 IPR038933 GO:0045892
Dere02g1230 193 Pfam Transcriptional repressor, ovate 117 173 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1230 Dere-ChrDere02 11804207 11804788 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dere02g1230 Ovate 1.2e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g1230 02 11804207 11804788 Dere02g1230 02 11804207 11804788 ECH