Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1229 ATGAAGCTCATCCCCTCTCTTCTCAAGAACACACAACCAGCCTGGTCATGGCCTTCCTGTCACCAACCCAGAACCCTCTCTTTCAGAGCCAACACCAACACCAACACCAACACCAACAACGACATCTTCAGAACCATCAACTCCGCCTACGTCGATGCCACCCTTGACGTCCCTGACCAATCCGATGCAGCCGATCCAGTGGAGACTGTCATTCGTGGGTTGAGATCAGATCGTCTGTTCTTCGAGCCCGACCACACTAGCTCCATTTTGGAGGCCAAATCAGCACCCACCTTAACCTTCAAAGACAGCCTCGTACTGTCTGTGGAGTCCCGGGATCCTTACGTGGATTTTCGCAAGTCAATGGAGGAGATGGTGGAGGCTCACGGCGTCAAGGACTGGGACAGCCTCGAGGAGCTTTTGTGTTGGTATCTCAGGGTCAACGGCAAAAGCAATCACGGCTATATCGTTGGTGCTTTTGTTGATTTATTGGTCGCTCTTGCCCTTGCATCTGCTTCTTCTTCCACATCCTCTAATTCTTCTCATTCTCCCTCTTCTCCTCTTTCTTTTTACAGTACTTCTTCTCCGACTTCTTCTTTTAGTACTCCTTATGCTTCGTGTCTTGTATCTGAACCAGAGGTTGATACTCCTAGTTCGTCTCTCTTGTTAGAGCAAGTTAAGGAAGAGATTAAACACGAAGATGAGGCTTCTTCCTATTCAAATGTCTGA 726 0.4862 MKLIPSLLKNTQPAWSWPSCHQPRTLSFRANTNTNTNTNNDIFRTINSAYVDATLDVPDQSDAADPVETVIRGLRSDRLFFEPDHTSSILEAKSAPTLTFKDSLVLSVESRDPYVDFRKSMEEMVEAHGVKDWDSLEELLCWYLRVNGKSNHGYIVGAFVDLLVALALASASSSTSSNSSHSPSSPLSFYSTSSPTSSFSTPYASCLVSEPEVDTPSSSLLLEQVKEEIKHEDEASSYSNV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1229 241 MobiDBLite consensus disorder prediction 174 241 - -
Dere02g1229 241 Pfam Transcriptional repressor, ovate 110 166 IPR006458 -
Dere02g1229 241 MobiDBLite consensus disorder prediction 174 222 - -
Dere02g1229 241 NCBIfam uncharacterized plant-specific domain TIGR01568 106 167 IPR006458 -
Dere02g1229 241 ProSiteProfiles OVATE domain profile. 105 165 IPR006458 -
Dere02g1229 241 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 46 168 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1229 Dere-ChrDere02 11788549 11789274 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dere02g1229 Ovate 1.4e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2644 01 41279984 41281975 Dere02g1229 02 11788549 11789274 CCT
Dere02g1229 02 11788549 11789274 Dere01g0167 01 5387334 5388077 ECH
Dere02g1229 02 11788549 11789274 Dere02g1229 02 11788549 11789274 ECH