Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1178 ATGCAAAGGATAAAAAAACGTAATTTCACCAAGACTATTGAGCTGCAAATTGGATTGAAGAACTATGACCCTCAGAAAGAGAAGCGTTTCAGTGGTTCTGTTAAACTTCCTCATATTCCGCACCCTAAGATGAAGATTTGTATGCTTGGTGATGCTCAGCATGTGGAAGAGGTTATCACAAAGCCAGTGATAGTTGAAACTTCAAACTTTAATCCTGAGGATTTTTGGATCTATGTTATGGTATTTATATTGTCAGGATTGAATGCAGAATGGGATGGGGTTGGGTGGTGTGAAGTTGGGAGGGGAGACGCATTCATTCTAGAAGAGGCAGAGGCCAGGCGAGGGGAGGGTGTGGGGATGGGTTGCAGAAACGCTCCCTCCTCTTTACCAGGATGGGAAACATTTGAGGACAACAAGAGACGTGTTCCCTCGTTAAGGATTCTCAATTTTGTGGGATTTTTCAAAAGCTTGGATCCATGGTCTTCATGGCATTATCCCATTGCTAAAGAGGAAAATGGCGATTGTCGATTTTGTTTAGTTGTCATAAGTACTTTGTTAGGGTTTAGGGAAATTTGTAAACTCAAGTTGACGTAG 594 0.4209 MQRIKKRNFTKTIELQIGLKNYDPQKEKRFSGSVKLPHIPHPKMKICMLGDAQHVEEVITKPVIVETSNFNPEDFWIYVMVFILSGLNAEWDGVGWCEVGRGDAFILEEAEARRGEGVGMGCRNAPSSLPGWETFEDNKRRVPSLRILNFVGFFKSLDPWSSWHYPIAKEENGDCRFCLVVISTLLGFREICKLKLT 197
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1178 197 Gene3D - 1 71 - -
Dere02g1178 197 SUPERFAMILY Ribosomal protein L1 3 58 IPR023674 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere02g1178 Dere-ChrDere02 11285556 11290020 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1178 5 58 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 90.741 5.88e-30 108