Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1168 ATGGGGGTGGCGGAAGGTGAGATGAACTCGCGAGGCGAGGCGGAATCAGGGCTCCAACGGGACCAACAACACAAGAACAATCACCCGTTCTCTTCGATCGGAAGACAATCATCAATATATTCCCTCACTCTCGACGAGTTCCAGCACACTCTGTGCGAGAGCGGCAAAAATTTTGGGTCCATGAACATGGACGAGTTTCTCAGCAGCATCTGGAACGCCGAAGAAAACCAAGGCATTACCAGCAACAACACGAGTTCGGGTCTAAATGAAGCATCCACTGACAAAGGGATGATACGGAAGCAGCCAAGCCTTCCTCGTCAGGGCTCACTGACACTTCCAGCGCCGCTCTGTAGGAAAACGGTGGACGAAGTGTGTTCTGAGATCCGCAGAGGACAGCAGAATCATCAGAGCAATAACGGTGGTACAAACGGTGATGCGCAGAGTACCGAATCTGCCCCTCGCCAGCCCACTTTTGGCGAGATGACTCTGGAGGATTTCTTGATCAAAGCAGGGGTAGTTCGGGAATCATATACAACTACGATGCCTTCCCAACCCCAAGCGTCAACCCAGCAGCGACAGTACGGGATGTACCCGAATAACAACTCTACAATGGGACCCTCTTTTGTTGGAAGGCCCGTGCTGGCAGGCAATGTAGTTCTGCCATACCAGACGGTGGCTCAGGGAGAGCCTTCTTCTCGGTATTCCGGAAATGGTAAGAGGGATAATGGGTATCCTCCGCCGCCGCCGGGGGTTTGCCATGGAGGGAGGGTGGTGAATGGAGGCGATGGGTATGGAGCGGCGCCGCCGGCTATGGGATTGTGTGCGCCGGTGAGCCCGGTTTCGTCGGATGGGCTGGGAACAAATGAGGAATGTGGTGGTCAGTTTGGAATGGAGATGGGGGTGTTGAGAGGAAGGAAGAGAATCATAGATGGTCCGGTGGAGAAGGTGGTGGAGAGAAGGCAGAGGAGGATGATCAAGAACAGAGAGTCAGCGGCGAGATCTAGAGCCAGAAAACAGGCATACACTGTTGAATTAGAAGCAGAACTGAACCAATTAAGAGAAGAGAACGCCCGTCTGAAACAGGCGCTGGCGGAGCTTGAGAGGAGAAGAAAGCAACAGAGTCTTGAGGAATTAAACATGAGAGTTCCTACCAAAGCTCAGAAGGCAAGAGAGAAATTGATAGCTTTGAAAAGGAACATAAGTTGTCCTCTGTGA 1215 0.5243 MGVAEGEMNSRGEAESGLQRDQQHKNNHPFSSIGRQSSIYSLTLDEFQHTLCESGKNFGSMNMDEFLSSIWNAEENQGITSNNTSSGLNEASTDKGMIRKQPSLPRQGSLTLPAPLCRKTVDEVCSEIRRGQQNHQSNNGGTNGDAQSTESAPRQPTFGEMTLEDFLIKAGVVRESYTTTMPSQPQASTQQRQYGMYPNNNSTMGPSFVGRPVLAGNVVLPYQTVAQGEPSSRYSGNGKRDNGYPPPPPGVCHGGRVVNGGDGYGAAPPAMGLCAPVSPVSSDGLGTNEECGGQFGMEMGVLRGRKRIIDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENARLKQALAELERRRKQQSLEELNMRVPTKAQKAREKLIALKRNISCPL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1168 404 MobiDBLite consensus disorder prediction 227 256 - -
Dere02g1168 404 Pfam bZIP transcription factor 319 367 IPR004827 GO:0003700|GO:0006355
Dere02g1168 404 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 317 373 - -
Dere02g1168 404 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 317 369 IPR004827 GO:0003700|GO:0006355
Dere02g1168 404 MobiDBLite consensus disorder prediction 131 156 - -
Dere02g1168 404 Gene3D - 317 368 - -
Dere02g1168 404 SUPERFAMILY Leucine zipper domain 319 369 IPR046347 GO:0003700|GO:0006355
Dere02g1168 404 MobiDBLite consensus disorder prediction 77 92 - -
Dere02g1168 404 MobiDBLite consensus disorder prediction 1 33 - -
Dere02g1168 404 CDD bZIP_plant_BZIP46 319 373 - -
Dere02g1168 404 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 35 372 IPR043452 GO:0003700|GO:0045893
Dere02g1168 404 SMART brlzneu 315 381 IPR004827 GO:0003700|GO:0006355
Dere02g1168 404 MobiDBLite consensus disorder prediction 77 111 - -
Dere02g1168 404 Coils Coil 335 376 - -
Dere02g1168 404 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 322 337 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1168 Dere-ChrDere02 11218780 11220815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1168 1 373 bZIP Transcription Factor Family AT2G36270 49.777 1.07e-110 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere02g1168 bZIP_1 7.7e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2696 01 41748223 41751419 Dere02g1168 02 11218780 11220815 CCT