Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1160 ATGGCGGAAGAGCACCGTTGCCAAGCTCCCGAAGGCCACCGACCCTGCGCTAACAACTGCGGCTTCTTCGGCAGCCCAGCAACTATGAATCTCTGTTCCAAATGCTACGGAGATTTCCGTTTGAAGGAACAACAAGAAGCCTCTACCAAATCCACCATCGAAACCGCTCTGTCCTCCACCGCTTCTGCGCCGTCGTCAATGTCATCTCCGTCACCGGCCATTGACTCTCTCCCTCCTCCGCCAACGTTGACCTTGCCGGAGGTAGCAGTAGATGCGTCGAGCTCGGCTGCCGTATCCTTGGGTCCGGAAGTAGCGGTGGCGCAACCGAACCGATGCGCGACGTGCCGAAAACGGGTCGGGTTGACCGGGTTCAAGTGCAAGTGCGGCGTCACGTTTTGTGGGGTCCACAGGTATCCAGAGAAACACGGATGTAGCTTTGATTTCAAGAAGGTAGGACGAGAGGAAATAGCTCGAGCAAATCCTTTGATCAAAGCGGAGAAGCTCGAAAGGATTTAA 516 0.5543 MAEEHRCQAPEGHRPCANNCGFFGSPATMNLCSKCYGDFRLKEQQEASTKSTIETALSSTASAPSSMSSPSPAIDSLPPPPTLTLPEVAVDASSSAAVSLGPEVAVAQPNRCATCRKRVGLTGFKCKCGVTFCGVHRYPEKHGCSFDFKKVGREEIARANPLIKAEKLERI 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1160 171 ProSiteProfiles Zinc finger AN1-type profile. 106 152 IPR000058 GO:0008270
Dere02g1160 171 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Dere02g1160 171 SUPERFAMILY AN1-like Zinc finger 101 166 IPR035896 -
Dere02g1160 171 PANTHER AN1-TYPE ZINC FINGER PROTEIN 14 171 - -
Dere02g1160 171 MobiDBLite consensus disorder prediction 47 86 - -
Dere02g1160 171 Pfam A20-like zinc finger 14 36 IPR002653 GO:0003677|GO:0008270
Dere02g1160 171 Gene3D - 1 72 - -
Dere02g1160 171 MobiDBLite consensus disorder prediction 48 72 - -
Dere02g1160 171 FunFam Zinc finger AN1-type containing 6 88 167 - -
Dere02g1160 171 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 16 58 - -
Dere02g1160 171 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Dere02g1160 171 Gene3D - 89 167 IPR035896 -
Dere02g1160 171 Pfam AN1-like Zinc finger 112 148 IPR000058 GO:0008270
Dere02g1160 171 SMART AN1_Zf_4 112 149 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1160 Dere-ChrDere02 11137891 11138406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1160 1 171 C2H2 Transcription Factor Family AT3G52800 58.286 6.49e-57 174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2709 01 41854805 41855305 Dere02g1160 02 11137891 11138406 CCT