Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1153 ATGAAACTGCGGAGGCTTCACCACTTCTTCTATTGGTCTGCATTTGAAGTCGCCGTTTGCTCTCAGTGTTCCATTCGGATCCCATCTCCACCGTACCAGAAAATGAAGGTTATCGCTGCTTATTTGCTGGCGGTTTTGGGAGGGAACACCTGCCCTTCCTCCGCCGATCTCAAGGACATCCTTGGCTCTGTTGGAGCAGAGGTTGATGATGATAAGATTGAACTTCTTTTGTCTGAAGTCAAGGGTAAAGACATAACAGAGCTAATTGCCACCGGTAGGGAAAAGTTGGCCTCTGTGCCCTGTGGTGGTGGTGGTGGTGCAGTTCCAGTGGCTGCTGCCCCTGGTGGAGGTGGTGCTGCTGCTGCTCCAGCTGCAGCCGAGCCAAAGAAAGAGGAAAAGGTTGAGGAGAAAGAAGAATCCGATGATGACATGGGCTTCAGTCTCTTCGACTAA 453 0.5121 MKLRRLHHFFYWSAFEVAVCSQCSIRIPSPPYQKMKVIAAYLLAVLGGNTCPSSADLKDILGSVGAEVDDDKIELLLSEVKGKDITELIATGREKLASVPCGGGGGAVPVAAAPGGGGAAAAPAAAEPKKEEKVEEKEESDDDMGFSLFD 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1153 150 FunFam 60S acidic ribosomal protein P2 32 93 - -
Dere02g1153 150 Gene3D - 34 93 IPR038716 -
Dere02g1153 150 MobiDBLite consensus disorder prediction 115 150 - -
Dere02g1153 150 CDD Ribosomal_P2 35 150 IPR044076 GO:0002182|GO:0003735|GO:0022625
Dere02g1153 150 Hamap 50S ribosomal protein L12 [rpl12]. 36 150 IPR027534 GO:0003735|GO:0005840|GO:0006414
Dere02g1153 150 Pfam 60s Acidic ribosomal protein 52 149 - -
Dere02g1153 150 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 35 150 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1153 Dere-ChrDere02 11061015 11061941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1153 35 150 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 63.793 3.80e-32 108