Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1152 ATGGGTTCATTCTCTGGCACTTGTGAAATAGTTGAGGCAGAGGAAGAGCTAAATCTAGGTAAATCTGCAAGGACTGATCAGTCAAATTCTGGATTTAGATTGGGCGAGAGAAATCAGAAGCTTCCAGTGCTACAACTGGGATACAATGACGATCTAGACAATGATATTAATAAGCTGTTTGAATCAATCACCCTTAAAACTTCATCAAGAGATTCAGGTCTTTTACAAGATGGTGCAAGCCCTAAGATGAAAAATGCCTTAAAAAAGCCAATAACAGTTGGTATTTCTCAGTCTCCTCGAGTTGGTCCTTCTGAGCCTGCAACTTTGAAGCAGGCATTAAGAGATCTATGTATATCTAAGGCATCAGAAATGGCTGCCATGAAGCGGTTATCCAAGTCAACAGTTTCTCCAAGAGTATCTGAGGTTGGGAAGATAAAGGCATTGTACAATTCAGTTGTAGCTGAAGGCAGTCGACCAGGGCCCTCCTTTGTTGAGAGTAAAGGGGGTGGAATTGAAATATCACTAGTATCAGAAGAGAGCAAATCAGTTTCCTTGGAAGAAACATGTCAGCCTCATCACACTGCCAATATCACTTCATCCAGCATAAGTGTTCATTCTTCTCCCAAAATTGCTATTGCAACTACAGAAAATGATACTGTAACTTCAACAATGAAAAGTGATTTGGTGAGTTCATCAAGTAAAATTGGGGTTCAATCACAACAATTGGATTCTGGTCAGACAGGAAAACAAGCATCTGCATATTCTCCACCTGTTTCTAATACTGATGGAAGCAAATTAGAGTCACCAGAAAATGTTTCTACCCCTAAAAAATTAGGAAATAAAGCATTTGTATCTAAGGGTGGTCGGAAAGTTAAGTTGCAAGCAGCATCTTCCTCATCTACATCTACTTCAGTGAATGGCAATAGAGTGAGCAAGTTGTCCTACAATGCCCCCCGTACAGTCAAATCAGTCATAAGGAATAAGAATTTGAACAAGAAGAAACTTAAGCAGGATTCTGGTTCTGCTCTAAGTGCCCCTACATCAAATGAAATGAATAATAAGTCAGTTCCTGGTACAACTCCACTGGTATGTGAGAGATGTCGGTGTGCTTTAGAGAGTGCAAGTAAAGAGAAGAGCCAAGATACTGTAGCATCAGACTGTGCCAATCTTGGAGATGGAGTGAGCTTGAGTAATGTGAACTATGGTGCAAATAAATCTGTTCCTACATCAAATAGCTATAACCGAAGTAAAGCAGTTGCAAAGGTGAAAAAGAACACCAGATTGAAAGAGCAACTTGAATTTTCACAAAGTTCAAAGAGTAGCCAAGGTGAGTACAGTAGTAGTACAAGTACCAGTGATGAGAGCAATGTGAGTGGGTTTAGTTGTGGCAATAGGCCTCACATGTCAAAGGATGTTAGATGGGAAGCCATACGTCAAGCTCATATGCAACATGGAGTTTTGGGCTTGGGGCAGTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGGACTGTATATCTTGCTGAACTAATTGGCACAAGTTGCTTATTTGCTATCAAGGTCATGGACAACGAATTTTTGGCAAGAAGGAAGAAGATGTCTAGGGCTCAAACTGAAAGAGACATATTAAGGATGTTGGATCATCCTTTTCTACCCACACTCTATGCACAATTTACATCAGATAATTTGTCATGCCTGGTCATGGAGTATTGTCCTGGTGGAGATCTTCATGTTCTACGGCAGAAGCAGCCTGGTAGAAGTTTTACTGAGCCAGCAGCAAGGTTTTATGTTGCTGAGGTCCTTCTTGCATTAGAATACTTGCACATGCTTGGAGTTGTTTATCGTGATTTGAAACCTGAAAACATTCTTGTTCGAGAAGATGGACACATTATGCTTACAGATTTTGACCTGTCACTTAGGTGTGCTGTTAGCCCAACACTTTTGAAATCATCTTTTGATGCAGATCCAGCAAAGATTTCTGGTCCTTGTGCACAATCAAGTTGCATCGAGCCATTCTGCATTGAACCATCCTGTCAAGTTTCATGCTTCAGCCCTAGACTCTTACCTGCTGCTGCTAAAGCAAGGAAAGTAAAAGCTGATCTTGCTGCCCAGATCAGATCATTGCCACAGCTTGTGGCGGAGCCTACTGATGCAAGATCAAATTCTTTTGTTGGTACCCATGAATACTTGGCACCTGAGATCATCAAAGGAGAGGGACATGGAGCTGCAGTTGATTGGTGGACCTTTGGTGTTTTTCTTTATGAACTTTTATATGGTAGAACACCCTTTAAAGGTTCTAATAACGAAGAAACATTAGCTAATGTGGTGTTGCAAAATCTCAGATTTCCTGACAGTCCATTTGTTAGTTTCCAAGCCAGGGATCTAATAAGGGGGTTGTTGGTTAAAGAGCCTGAAAGCCGTTTGGGTTCTGAGAAAGGAGCTGCTGAGATTAAACAGCATCCCTTCTTTGAGGGCCTTAATTGGGCGTTAATTCGATGTGCTGTCCCACCAGAGCTTCCAGATTTTTGTGATTTTGGAGTTCCAGACATGACCTCACAGGGCAAGGGCAAGTATTTCGAGTGTAAAGCAACAGGAGCACATGTGGAATTTGAGTTGTTTTGA 2625 0.413 MGSFSGTCEIVEAEEELNLGKSARTDQSNSGFRLGERNQKLPVLQLGYNDDLDNDINKLFESITLKTSSRDSGLLQDGASPKMKNALKKPITVGISQSPRVGPSEPATLKQALRDLCISKASEMAAMKRLSKSTVSPRVSEVGKIKALYNSVVAEGSRPGPSFVESKGGGIEISLVSEESKSVSLEETCQPHHTANITSSSISVHSSPKIAIATTENDTVTSTMKSDLVSSSSKIGVQSQQLDSGQTGKQASAYSPPVSNTDGSKLESPENVSTPKKLGNKAFVSKGGRKVKLQAASSSSTSTSVNGNRVSKLSYNAPRTVKSVIRNKNLNKKKLKQDSGSALSAPTSNEMNNKSVPGTTPLVCERCRCALESASKEKSQDTVASDCANLGDGVSLSNVNYGANKSVPTSNSYNRSKAVAKVKKNTRLKEQLEFSQSSKSSQGEYSSSTSTSDESNVSGFSCGNRPHMSKDVRWEAIRQAHMQHGVLGLGQFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDNEFLARRKKMSRAQTERDILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQPGRSFTEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVSPTLLKSSFDADPAKISGPCAQSSCIEPFCIEPSCQVSCFSPRLLPAAAKARKVKADLAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQNLRFPDSPFVSFQARDLIRGLLVKEPESRLGSEKGAAEIKQHPFFEGLNWALIRCAVPPELPDFCDFGVPDMTSQGKGKYFECKATGAHVEFELF 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1152 874 MobiDBLite consensus disorder prediction 328 357 - -
Dere02g1152 874 CDD STKc_phototropin_like 491 842 - -
Dere02g1152 874 PANTHER FLIPPASE KINASE 1-RELATED 290 843 - -
Dere02g1152 874 FunFam serine/threonine-protein kinase D6PK-like 576 643 - -
Dere02g1152 874 Pfam Protein kinase domain 493 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1152 874 Pfam Protein kinase domain 721 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1152 874 MobiDBLite consensus disorder prediction 336 357 - -
Dere02g1152 874 FunFam serine/threonine-protein kinase D6PK-like 719 842 - -
Dere02g1152 874 Gene3D Transferase(Phosphotransferase) domain 1 717 838 - -
Dere02g1152 874 Gene3D Transferase(Phosphotransferase) domain 1 576 641 - -
Dere02g1152 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Dere02g1152 874 MobiDBLite consensus disorder prediction 292 315 - -
Dere02g1152 874 MobiDBLite consensus disorder prediction 431 463 - -
Dere02g1152 874 SUPERFAMILY Protein kinase-like (PK-like) 471 841 IPR011009 -
Dere02g1152 874 FunFam Serine/threonine-protein kinase D6PK-like 490 575 - -
Dere02g1152 874 ProSiteProfiles Protein kinase domain profile. 492 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1152 874 MobiDBLite consensus disorder prediction 231 275 - -
Dere02g1152 874 Gene3D Phosphorylase Kinase; domain 1 491 575 - -
Dere02g1152 874 MobiDBLite consensus disorder prediction 231 315 - -
Dere02g1152 874 MobiDBLite consensus disorder prediction 398 464 - -
Dere02g1152 874 MobiDBLite consensus disorder prediction 398 419 - -
Dere02g1152 874 SMART serkin_6 492 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1152 Dere-ChrDere02 11051248 11054673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1152 1 874 AGC Kinase Gene Family AT3G52890 51.959 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dere02g1152 Pkinase 3.2e-36 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2972 01 44259340 44260033 Dere02g1152 02 11051248 11054673 CCT
Dere01g0241 01 6721611 6725152 Dere02g1152 02 11051248 11054673 CCT
Dere02g1152 02 11051248 11054673 Dere01g0241 01 6721611 6725152 ECH
Dere02g1152 02 11051248 11054673 Dere02g1152 02 11051248 11054673 ECH