Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1145 ATGATGGCCCAGAAGCACTTACACGAGCTACTGAAGGAGGATCAAGAACCATTCCTTCTAAACAATTACATTTCCGATAGGCGTAGCCAGCTGAAGAGGCCTTCCCCCAAGACTTGTATGCAGGTCAAGAAGCGGAAACCTATGTATCCGAACTTAAACTTTCCCGTTAATTTCTGTAAAAACGCTTGCTTTTTCTCATCCTCCGACACGCCAGACCTCAGAAAATCACCCCTCTTCCAATTAGCTTCTCCTGCCAAAAGTCCCACCTCCTCTCCCAATCCTATTTTTCTCCACATTCCTGCTCGAACGGCAGCACTTCTTCTCGAAGCCGCTCTTCGGATTCAGAAACAATCCTCCTCCTCTACCAATACCAAACCCCAACACAAAAACAATGGCTTTGGCCTATTTGGGTCATTCTTTAAGAGACTAACGCAACGCAGTCGGAATCGAAAGCGCGAAATAGAGGGTCAAGGGGAAAAGGCCTCCGTGAAGGATATATTAAGCTGGGATTCGTCAGCTGAGTGTAGAAAACTTTCCAACGGATTCTCCGAGAAGACGGACTCTCAGAAGGATAACAATATATCGGACTTAAGTGCCTGTGAGGTGGAGTTTGTCTGTCCTTGCAATGGTAGGTCTAGCAGTGCCGTGTGGTCGGAGAGCAATGAAGATAAATCTTTGGGCATGGAAACGTCGAGTAGTAGCCAGTGGGATGAGTCTGAAGAGATTGACTATGTTTCCAAACAGAACCCCGTCACAGAGTGTGCTTGCTGTGATGATAATCCCATCTGCGAAAGCCCTTTCCGTTTTGTTCTATTAAGGAGCCCCTCCTCTGCCTCCCAGACACCGGAATTAGCTTCACCGGCATCGTCTCCGAGTCGCCGCAAAACTCAGGACAAAGAGAATAATGGATCAGAGAGTGCCAAGCAATGTCAATCGGGGGAGGAAGCAGACGAGAAAGAACAGTGTAGTCCAGTCTCTGTTTTAGACCCACCATTCGAGGACGATGACGATGGGCATGAAAACAACGAGCCGGAGGATGAGGATGGTTTCGATTTGGAGAGCAGCTATGCCATTGTACAGAGAGCTAAGGAGCAGCTTCTGTACAAGCTTCGTAGATTTGAGAAACTTGCAGGGTTGGATCCTCTTGAACTGGAGGAAAGAATGTTTGATCAAGAAGAAGATATTGATGAAACATCTGTTGAAGAGTATGATTGTGGAGATGACAGAAACGAAACATCAGAGAAAGAAAAGGACTACAGGGAGTTAGTAGCAGAAGTCCTCTGCCAGTCAAGCTTGCAGGAGACAGGACAAATCTCAGAAGACCTCAAGAGACTAATATCTGATATGGCAATGGAGGAAACCGAAATGAGTGAGTTGGAAGACAGAGAGAAGGTGATCAGAGGGGTTTGTAAGAGGATGGAATTGTGGAAGGAAGTGGAGAGAAACACAATTGATATGATGGTAGAACAAGACTTCAGCAGAGAGGAAGGTGGGTGGAAGAAAAATGTGGAATATATAAGAGAAGTGGCTAGAGAGCTTGAGCTTGCTATCTTTGGATTTCTAGTGGAAGAAATATCAGAGGAGCTAGCATGTTAA 1596 0.4605 MMAQKHLHELLKEDQEPFLLNNYISDRRSQLKRPSPKTCMQVKKRKPMYPNLNFPVNFCKNACFFSSSDTPDLRKSPLFQLASPAKSPTSSPNPIFLHIPARTAALLLEAALRIQKQSSSSTNTKPQHKNNGFGLFGSFFKRLTQRSRNRKREIEGQGEKASVKDILSWDSSAECRKLSNGFSEKTDSQKDNNISDLSACEVEFVCPCNGRSSSAVWSESNEDKSLGMETSSSSQWDESEEIDYVSKQNPVTECACCDDNPICESPFRFVLLRSPSSASQTPELASPASSPSRRKTQDKENNGSESAKQCQSGEEADEKEQCSPVSVLDPPFEDDDDGHENNEPEDEDGFDLESSYAIVQRAKEQLLYKLRRFEKLAGLDPLELEERMFDQEEDIDETSVEEYDCGDDRNETSEKEKDYRELVAEVLCQSSLQETGQISEDLKRLISDMAMEETEMSELEDREKVIRGVCKRMELWKEVERNTIDMMVEQDFSREEGGWKKNVEYIREVARELELAIFGFLVEEISEELAC 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1145 531 PANTHER OS04G0572500 PROTEIN 2 529 - -
Dere02g1145 531 MobiDBLite consensus disorder prediction 330 352 - -
Dere02g1145 531 MobiDBLite consensus disorder prediction 275 292 - -
Dere02g1145 531 MobiDBLite consensus disorder prediction 212 242 - -
Dere02g1145 531 MobiDBLite consensus disorder prediction 388 416 - -
Dere02g1145 531 Coils Coil 442 462 - -
Dere02g1145 531 MobiDBLite consensus disorder prediction 275 355 - -
Dere02g1145 531 MobiDBLite consensus disorder prediction 212 239 - -
Dere02g1145 531 MobiDBLite consensus disorder prediction 388 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1145 Dere-ChrDere02 10927132 10930172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1145 1 333 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 43.149 6.17e-64 213