Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1133 ATGAACCCAAAATACGAAAATTATCCAAAATCTCCACCAAGTTCTCCTGATTTGATTACTGAATCTAAGGTTAAAACTCCCGCTGATACGATGTCTTCGGCTCGGTTGCAACAGATTGAGCTGGGTTCTGAATCATTTGCGTTGGACTCTCTATTCGAAAATACCTCGGCTAGTCTTGTTATGGCGGATATTGGCCTTTCTGGACCTGTTCCCTCGACTTCGTTCGAAGCATTTCCTGCTATGTGCGCGACGTCTATATCCTGTCCTCCCCCTGTTATGGTTCTCAGTGAGAGAGCTCCCTTGTTACCATCACCTACCGGTGAGGAGGCTGGATTAATTGGGAAAAGCCGTGAGCTTGAGAGCGTTGGCGTGCCACAGCCGCTGGAGTGTTTACAAGGGAATCCAATTCCGCCGTTTCTATCTAAGACCTTCGATCTAGTGGATGATCCATCGCTAGATTCGATTATATTATGGGGCTCGACTGGTGAGAGTTTCGTGGTGTGGGACCCCGTGGAATTCGCAAGACTCATCTTGCCACGAAATTTCAAGCATAACAATTTTTCCAGTTTTGTCCGTCAGCTAAATACTTATATTGCGTACTCCAATACAACTCCATCTGCTCATGATGGCGTAGATTTTGGTGTGACTAAATCTGTTTTATTCTTTGGCTCTCTTCTATTTCTGTTGTCTTCATTCTCATGTCTCTTGGGCATGTGTATTCAGGGGTTCCGCAAGATTGACGCTGATAAGTGGGAGTTTGCCAATGAAGCATTTCAGCGAGGGAAAAGACATCTACTGAAGAACATCCAAAGGCGCAGGTCACCTCAATCCCAGCAGGTTGGTAGCTATATTGGGCCTTCAACTGAAGCAGGGAAGTCTGGAATTGAGATTGAGATAGAAAGATTGATGAAGGAGAGAAGTATGTTAATGCAAGAGGTGGTTGATTTGCAGCAACAACAGCGAAGAACTGTTCGTCTTGCGGGAGAAGTGAACCAGAGACTCCAGTCTGCAGAGCAGAGACATAAACAAATGGTTTCTTTACTGGCAAAGTTATTTCAAAATCCAGCCTTTTTAACTTGTCTTAAGGAAAAGAAGGAACATGAAATAGGTTCTCCAAGAGTGAGAAGGAAGTTTGTCAAGCAGCACCAACATGAAACTGGAACATCAGCGCATTCTTTGGAGGAAGGTCAGATTGTGAGATTCCGACCTCACTGGAGCAATGTAACCATCCTTTCTGAATCCAAACTGAATCCAGTCTCCTTTGAACAGTGTCCTGGCTACCTTTCACAGGGTTTGGCTAACAAAATTAATGCAGGGGCACAGAATCTGACGTCACAAATTGAGAATGTTGTTTCTGATGAAATGGCTGCAGTGAATGAGAATATGGCAACGCCTAAGATCACTGGAGAAGGATCATCAAACTTAGGACTTGAAGATCCTCTTTTCAAAGGGGAAAAAATCATGAGCCCCGATCAAGGAATTATTCCACGGTATTCTGTCTCTGCCCCTGAGGACTTGACCAAGGAGAAGGGCTTTCGAGAGTTTTCCCCTCTTGGAACTGAAAGCATTATCAAACCAGAAGATATATGGAACTCATGCGTTAATGTTAGCCATGCTGCTACCAGCCCTGGGAATGAGCTGTGGGGCAGTCCAGTTAATTTTGAAGTGCCAGAATTTGGAGTGGCAGGTAGTGAGTCGGACATTTGGGATATAAGCTCTCTGGAAGCTGCAGGATGTTTGGGTATTGATCAGTGGCCAACTGAAGAATCCCCTCTTGATGAAACACAAAGTCAAGCCAAAATATGA 1806 0.4468 MNPKYENYPKSPPSSPDLITESKVKTPADTMSSARLQQIELGSESFALDSLFENTSASLVMADIGLSGPVPSTSFEAFPAMCATSISCPPPVMVLSERAPLLPSPTGEEAGLIGKSRELESVGVPQPLECLQGNPIPPFLSKTFDLVDDPSLDSIILWGSTGESFVVWDPVEFARLILPRNFKHNNFSSFVRQLNTYIAYSNTTPSAHDGVDFGVTKSVLFFGSLLFLLSSFSCLLGMCIQGFRKIDADKWEFANEAFQRGKRHLLKNIQRRRSPQSQQVGSYIGPSTEAGKSGIEIEIERLMKERSMLMQEVVDLQQQQRRTVRLAGEVNQRLQSAEQRHKQMVSLLAKLFQNPAFLTCLKEKKEHEIGSPRVRRKFVKQHQHETGTSAHSLEEGQIVRFRPHWSNVTILSESKLNPVSFEQCPGYLSQGLANKINAGAQNLTSQIENVVSDEMAAVNENMATPKITGEGSSNLGLEDPLFKGEKIMSPDQGIIPRYSVSAPEDLTKEKGFREFSPLGTESIIKPEDIWNSCVNVSHAATSPGNELWGSPVNFEVPEFGVAGSESDIWDISSLEAAGCLGIDQWPTEESPLDETQSQAKI 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1133 601 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 125 403 IPR027725 -
Dere02g1133 601 Pfam HSF-type DNA-binding 139 272 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere02g1133 601 MobiDBLite consensus disorder prediction 13 29 - -
Dere02g1133 601 PRINTS Heat shock factor (HSF) domain signature 190 202 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere02g1133 601 PRINTS Heat shock factor (HSF) domain signature 177 189 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere02g1133 601 PRINTS Heat shock factor (HSF) domain signature 139 162 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere02g1133 601 SMART hsfneu3 135 272 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere02g1133 601 FunFam Heat stress transcription factor B-4 131 209 - -
Dere02g1133 601 MobiDBLite consensus disorder prediction 1 29 - -
Dere02g1133 601 Gene3D - 132 273 IPR036388 -
Dere02g1133 601 Coils Coil 292 319 - -
Dere02g1133 601 SUPERFAMILY "Winged helix" DNA-binding domain 134 199 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1133 Dere-ChrDere02 10848529 10851037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1133 85 417 HSF AT5G03720 46.765 1.67e-88 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dere02g1133 HSF_DNA-bind 3.8e-27 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g1133 02 10848529 10851037 Dere02g1133 02 10848529 10851037 ECH