Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1132 ATGGAAATGCCAGCTAGGAGATCCAACTACACACTTCTGAGCCAAATTCCTGATGACCAGTACGTTGGCGGAGCTGCCTTGTCCGGAACAACTGCTCCTACTTCGTTATTTGATTCTTCATCCGGGGACGGCAAGAACAATAAAGCCAAGGTTGACAGAGGGTATGATTGGGACTTAGTTGCTGATCATAGGGTCGCTCAGCAGGGAAATCGGATCGGGAATTTATATTCATCGATCGGGTTGCAGCGGCAGTCTAGTGGTAGCAGTTTTGGTGAAAGCTCGCTATCCGGGGAGTTTTATGCTCCAACTCTGTCGACCACAACTGCGAATGAGATCGATGCCTATGGGTACATGCATGATGATGGATTCAAGGTTGGTGGTGGCGTTGGTGTTGGAGGCGAGTTACGGAACAAGTTAACGGAGACTACAATAAGAACGGGAGGGTCATCATCAGGCAAAAGCTGGGCGCAGCAGACGGAGGAAAGTTATCAATTGCAGCAGGCTTTGGCACTTAGGCTTTCATCTGAGGCAACGTGTGCTGATGATCCCAATTTTCTGGATCCAGTACCAGATGAATCCGCTTTAAGGTCGTCATCCTCAAGTTCGGCAGAATCAGTTTCACATAGATTCTGGGTGAATGGCTGCCTATCTTACTTCGACAAGATTCCTGATGGCTTCTACCTAATTCATGGGATGGATCCTTATGTGTGGACTGTGTGTACTGATCTGCAGGAAAATGGCCGAATTCCATCGGTTGAATCACTAAAGTCTGTAGGTCGCTGCAATGATTCTTCACTTGAAGTAGTTTTGGTGGATCGACGTAGTGATCCTATCTTAAAAGAACTGCAAAATAGAGTACATAGCATTTCTTGTAGCTGCATAACCACAACAGAGGTTGTAGACCATCTTGCCAAGTTGGTTTGCAACCTTATGGGGGGTTCAGCTTCTGTTGGGGAAGATGACTTCATTTCCATCCAGAGGAAGTGCATTAATGATCTTAAAGATTGCTTGGGATCTGTTGTTCCAATTGGTAGTCTATCTGTTGGCCTCTGCAGGCATCGCGCTATACTGTTCAAAGTACTAGCTGACACTATTGATCTACCATGTCGGATTGCTAAGGGCTGTAAATATTGCTCAAGAAATGATGCTTCCTCTTGTCTCGTCCAATTTGAGCTTGACAGGGAATATCTGGTTGATTTAATTGGGAAGCCAGGTTACTTATTCGAGCCTGATTCACTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCAAGACATAAACCAGCTGAACCTACCATTGATTTCAGGTCATTGGCCAAACAGTATTTTTCGGACTGTCTATCTCTTGAGCTTGTCTTTGACAATGATTCTGCAGAACAGTTTGATGGGAAGTGCAGGGACAGAAATAACCCTAGGTCAAATTCAAATGATAGCAACAAAACTTCTCGCCGATATTTGCATCCGCAAGTTTCTCATTTAAGAACTCAAGATCAGGGTTCTGAAACATTTAAATCATGTAAAGCTCCTCAAAACATTGTAGACTCCACAGCTATGGCCAAGGATCCACTGCCTAGTCCTATAACATTGACAAATACAAATGCGGATGCTACTGAGGGTAGGAGGTTTGCTGAAGGAAGTCAACTAATCCCTAGCAGAGCCAGTAGAGAGCTTGGCCTTGATATGGAGGATTTTGACATACCTTGGAGCGATCTTGATTTAAAAGAGAGAATAGGATCAGGTTCTTTTGGAACAGTACATCGTGCTGAGTGGAATGGCTCGGAAGTTGCTGTGAAAATTTTAATGGAACAAGATTTTCATGCTGAAAGATTCAAGGAGTTTCTGAGGGAGGTTGCAATAATGAAACGCTTGCGGCATCCAAACATTGTTTTATTTATGGGCGCAGTTACTCAGCCTCCAAACTTATCAATTGTCACAGAATATTTGTCTAGGGGTAGCTTATACAGGCTGTTGCATAAACCTGGTGCCAGAGAGATGTTGGATGAAAGGCGTAGGCTAAGTATGGCTTATGATGTGGCAAAGGGAATGAATTATCTTCATAAACGCAATCCTCCCATTGTTCATAGAGATCTCAAGTCGCCAAACCTTCTTGTGGACAAGAAATATACAGTGAAGGTTTGTGATTTTGGTCTTTCACGTCTCAAGGCCAACACATTTCTCTCATCCAAGTCGGCTGCTGGGACTCCTGAATGGATGGCCCCGGAAGTTCTTCGTGATGAGCCTTCCAACGAGAAGTCAGATGTATACAGTTTTGGTGTAATCTTATGGGAGCTTACAACATTGCAACAGCCATGGAGTAATTTGAATCCTGCACAGGTTGTGGCTGCTGTTGGCTTTAAGGGCAAAAGGCTTGAGATTCCACGTGATTTGAATCCTCAAGTAGCTGCAATAATTGAGGTTTGTTGGGCTAGTGAGCCCTGGAAGCGTCCTTCTTTTTCAAGTATCATGGATTCCTTAAGATCATTGATCAAACCTCCTGCACCACAACCTGGTCGTCCGAACATACCATTACTTACCTAA 2553 0.443 MEMPARRSNYTLLSQIPDDQYVGGAALSGTTAPTSLFDSSSGDGKNNKAKVDRGYDWDLVADHRVAQQGNRIGNLYSSIGLQRQSSGSSFGESSLSGEFYAPTLSTTTANEIDAYGYMHDDGFKVGGGVGVGGELRNKLTETTIRTGGSSSGKSWAQQTEESYQLQQALALRLSSEATCADDPNFLDPVPDESALRSSSSSSAESVSHRFWVNGCLSYFDKIPDGFYLIHGMDPYVWTVCTDLQENGRIPSVESLKSVGRCNDSSLEVVLVDRRSDPILKELQNRVHSISCSCITTTEVVDHLAKLVCNLMGGSASVGEDDFISIQRKCINDLKDCLGSVVPIGSLSVGLCRHRAILFKVLADTIDLPCRIAKGCKYCSRNDASSCLVQFELDREYLVDLIGKPGYLFEPDSLLNGPSSISFSSPLRFPRHKPAEPTIDFRSLAKQYFSDCLSLELVFDNDSAEQFDGKCRDRNNPRSNSNDSNKTSRRYLHPQVSHLRTQDQGSETFKSCKAPQNIVDSTAMAKDPLPSPITLTNTNADATEGRRFAEGSQLIPSRASRELGLDMEDFDIPWSDLDLKERIGSGSFGTVHRAEWNGSEVAVKILMEQDFHAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAREMLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELTTLQQPWSNLNPAQVVAAVGFKGKRLEIPRDLNPQVAAIIEVCWASEPWKRPSFSSIMDSLRSLIKPPAPQPGRPNIPLLT 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1132 850 ProSitePatterns Protein kinases ATP-binding region signature. 582 603 IPR017441 GO:0005524
Dere02g1132 850 SMART serkin_6 576 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1132 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 697 709 IPR008271 GO:0004672|GO:0006468
Dere02g1132 850 MobiDBLite consensus disorder prediction 479 493 - -
Dere02g1132 850 Gene3D Phosphorylase Kinase; domain 1 569 654 - -
Dere02g1132 850 Pfam Protein tyrosine and serine/threonine kinase 577 830 IPR001245 GO:0004672|GO:0006468
Dere02g1132 850 FunFam Serine/threonine-protein kinase CTR1 655 840 - -
Dere02g1132 850 PRINTS Tyrosine kinase catalytic domain signature 691 709 IPR001245 GO:0004672|GO:0006468
Dere02g1132 850 PRINTS Tyrosine kinase catalytic domain signature 738 748 IPR001245 GO:0004672|GO:0006468
Dere02g1132 850 PRINTS Tyrosine kinase catalytic domain signature 801 823 IPR001245 GO:0004672|GO:0006468
Dere02g1132 850 PRINTS Tyrosine kinase catalytic domain signature 650 663 IPR001245 GO:0004672|GO:0006468
Dere02g1132 850 PRINTS Tyrosine kinase catalytic domain signature 757 779 IPR001245 GO:0004672|GO:0006468
Dere02g1132 850 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 181 833 - -
Dere02g1132 850 ProSiteProfiles Protein kinase domain profile. 576 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1132 850 CDD STKc_MAP3K-like 582 830 - -
Dere02g1132 850 Pfam Ethylene-responsive protein kinase Le-CTR1 203 407 - -
Dere02g1132 850 SUPERFAMILY Protein kinase-like (PK-like) 562 829 IPR011009 -
Dere02g1132 850 Gene3D Transferase(Phosphotransferase) domain 1 655 839 - -
Dere02g1132 850 MobiDBLite consensus disorder prediction 465 493 - -
Dere02g1132 850 FunFam Serine/threonine-protein kinase isoform 1 566 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1132 Dere-ChrDere02 10835373 10842395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1132 1 846 MAP Kinase Kinase Kinase AT5G03730 68.677 0.0 1052
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Dere02g1132 PK_Tyr_Ser-Thr 2.4e-71 CL0016