Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1119 ATGAAGACGAACAAGGCTTATCCCATAAACCTTGCCTTGGAATTGGGCTTGGTATTACTCTGTTTCGTACAATCTCTGGGTCTAATCCAAAATGACACACACGCCCTCACCCAATTCCGCCTTCAAGCCGACGCCCATGGCTATCTTCTGGCCAACTGGACCGGCGCCGACGCTTGCGCTGCCTTCTGGCGCGGCGTTCAGTGCTCCACTAATGGTCAAGTCGTCGGCATTTCGCTTCCTTCCCTTAATCTCCGAGGCCCTCTTGATTCTCTATCCCCGTTAAGCTACTTGCGCCTCCTTGACCTCCATGATAATCGCTTAAACGGCAGCGTTGCGCCTCTTTCTAACTGCACCAGCCTCGAGCTTCTTTATCTGTCCGGCAACGACTTCTCCGGAGAGATACCGCCGGAGATAGCTTCCCTCACGCGTCTTCTCAGGCTTGACCTCTCTGACAACAACATGAGAGGCACAATTCCTAAGGAATTGTCCAAACTGACCGGGCTTCTCACACTTCGGGTGCAGAACAATGAGCTCTCTGGCCAAATCCCTGACCTCTCTGTTTCTCTCGTCAAGCTTGCGGAACTCAATATGAGCAACAATGAGTTTTACGGAGGCTTACCCGATGGCATGTTGAAGAAATTCGGTGATGTAAGCTTCTCTGGGAATAAAGGTCTATGTGGGTCGATTCCCTTGCCGGTTTGTTCCTTCCCAACAGAGAATGTTCCTCCTTCTTCTTCGGCCTCGGCTCCAACAGTTCCTTCGAACCTGAGCTTGCCCCAGACAAGCATAAATTCTCCTCCCAAAAGCCAAACCCGAAAGCGGCTAAGTCCCGGAGTAATAGTAGCCATTGTGGTGGTGAACTGTGTGGCATTGCTGGTAGTCACCTCCTTCATCGTTGCTCATTGTTGCGCCAGTGGACGAACCTCCGATTCTATGGTGGGTAGTGAGATTGGGAAAAGGAAAAGTGGGAGTAGCTATGGAAGTGAAAAAAAGGTGTATGCGAGTGGGGGTGCAGATAGTGATGGGACTACTGGGACGGACCGAAGCAAGCTTGTATTTTTCGATAGAATGAGTCAATTCGAGCTGGAGGATTTGCTGCGAGCGTCGGCGGAGATGCTGGGGAAGGGAAGCTTGGGGACAGTCTATAAGGCAGTGCTGGATGATGGATGTACCGTAGCCGTGAAGAGACTCAAAGACGCAAACCCATGCGCCAGGAAGGAGTTCGAGCAGTACATGGACGTTATTGGAAAGCTCAAGCACCCCAACATTGTGAGACTCAGAGCCTATTACTATGCCAGAGAAGAAAAGCTTCTGGTCTTTGATTATCTCCCCAACGGAAGCTTGCATTCTCTTCTCCACGGGAACCGTGGCCCAGGAAGAATCCCACTGGATTGGACCACAAGAATAAGCTTGGTTCTCGGAGCAGCGAGAGGACTAGCTCGGATTCATGCTGAATATAGTGCAGCAAAAATCCCTCACGGGAACATCAAATCTTCCAATGTGGTACTCGACAAGAATGGCGTAGCTTGCATCTCTGACTTCGGCTTGTCTCTGCTATTGAACCCTGTTCATGCAATTGCAAGACTGGGTGGATACAGAGCACCTGAACAAGAAGAAATCAAGAGACTGTCTCAGCAGGCAGACGTGTACAGCTTCGGGGTCTTACTGTTGGAAGTCCTCACTGGGAAAACCCCATCACAGGAGCCTTCCCCAACTCATCCTAGGTTGGGTGAAGAGGAACAAGCCGTGGATCTCCCCAAATGGGTGCGATCTGTCGTGAAGGAAGAGTGGACAGCAGAAGTGTTTGATCAAGAACTGTTGAGATACAAGAACATAGAGGAAGAGCTGGTGTCGATGCTGCACGTTGGGTTGGCATGTGTGGTGGCAGAGCCTGAGAAGAGGCCAACTATGGCGGAAGTTGCTAAGATGATTGAGGATATCAGAGTGGAGCAATCTCCCCTTGGAGAGGATTATGATGAATCTCGCAATTCACTTTCGCCGTCGCTTCCCACCACTGAAGATGGGCTAGCTTAA 2034 0.5069 MKTNKAYPINLALELGLVLLCFVQSLGLIQNDTHALTQFRLQADAHGYLLANWTGADACAAFWRGVQCSTNGQVVGISLPSLNLRGPLDSLSPLSYLRLLDLHDNRLNGSVAPLSNCTSLELLYLSGNDFSGEIPPEIASLTRLLRLDLSDNNMRGTIPKELSKLTGLLTLRVQNNELSGQIPDLSVSLVKLAELNMSNNEFYGGLPDGMLKKFGDVSFSGNKGLCGSIPLPVCSFPTENVPPSSSASAPTVPSNLSLPQTSINSPPKSQTRKRLSPGVIVAIVVVNCVALLVVTSFIVAHCCASGRTSDSMVGSEIGKRKSGSSYGSEKKVYASGGADSDGTTGTDRSKLVFFDRMSQFELEDLLRASAEMLGKGSLGTVYKAVLDDGCTVAVKRLKDANPCARKEFEQYMDVIGKLKHPNIVRLRAYYYAREEKLLVFDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSAAKIPHGNIKSSNVVLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQEEIKRLSQQADVYSFGVLLLEVLTGKTPSQEPSPTHPRLGEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVAEPEKRPTMAEVAKMIEDIRVEQSPLGEDYDESRNSLSPSLPTTEDGLA 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1119 677 FunFam Nuclear pore complex protein NUP107 29 184 - -
Dere02g1119 677 ProSiteProfiles Protein kinase domain profile. 367 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1119 677 SUPERFAMILY Protein kinase-like (PK-like) 371 644 IPR011009 -
Dere02g1119 677 Gene3D Phosphorylase Kinase; domain 1 339 442 - -
Dere02g1119 677 CDD STKc_IRAK 373 647 - -
Dere02g1119 677 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 443 656 - -
Dere02g1119 677 Gene3D Ribonuclease Inhibitor 26 116 IPR032675 -
Dere02g1119 677 MobiDBLite consensus disorder prediction 240 272 - -
Dere02g1119 677 MobiDBLite consensus disorder prediction 307 343 - -
Dere02g1119 677 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Dere02g1119 677 MobiDBLite consensus disorder prediction 651 677 - -
Dere02g1119 677 Gene3D Ribonuclease Inhibitor 117 235 IPR032675 -
Dere02g1119 677 Pfam Protein kinase domain 371 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1119 677 SUPERFAMILY L domain-like 31 223 - -
Dere02g1119 677 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 649 IPR046959 -
Dere02g1119 677 FunFam pollen receptor-like kinase 1 337 442 - -
Dere02g1119 677 Gene3D Transferase(Phosphotransferase) domain 1 443 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1119 Dere-ChrDere02 10687564 10689666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1119 25 673 Receptor kinase-like Gene Family AT2G36570 67.313 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere02g1119 Pkinase 1.1e-34 CL0016