Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1115 ATGGAACCCAACGGACTAGGCGTTGGAATGTTTTCGAGCATGAGTTCTGGAATGCTGGGAGTGGAAACCCCTTCACAACAACAGCAACAAAACCTTTCGAATCCTCACAATTTGCATAGTAATCCCCAAATGGTTTCCTACGCTACGCACCACGACCTTGAACCCCACCCACAAAAACCGCAGCAATCCACCAAACATGGGTACCCTTATTCCACCAAGAACAAGCAACAGACGGGACTCAGTGACGAGGACGAGCCTGGGTTTCCCGCAGATGACAGCTCTGGGGATCCCAAGAGGAAAAGTACATCACCGTGGCAGAGAATGAAGTGGACGGACACCATGGTTAGGCTCTTAATAATGGCGGTTTATTACATTGGCGACGAAGCTGGTTCTGAAGGGACTGACCCTTCGGCCAAGAAGAAGCCTCTGGGGTTGTCGCAGAAGAAAGGGAAATGGAAATCGGTGTCCATGGCTATGATGGAGAAGGGGTATTATGTGTCCCCTCAGCAATGCGAGGATAAGTTCAATGACCTGAACAAGAGGTACAAGAGGGTGAATGATATTCTCGGCAAGGGAACGGCTTGTAGAGTGGTGGAGAATCAGAGCTTGCTGGACACTATGGATTTGTCGCCCAAGATGAAAGAAGAAGTGCGGAAATTACTCAATTCGAAGCACCTTTTCTTCAGGGAAATGTGTGCTTACCATCACAGTTGTGGTCACGGAAGCATCAGTGGGGCCCCTACAACTCAACCATCGCCGGAGGTCGGAACAGATCAACAAACACCGCATCGGCCGCCGCCACCTCGGCAGCAATGTTTTCACTCAACAGGAAATGGACTAAAGGTGGGAAGCGGGGAGGATGAGGATGAGGACGACGAGGACGACGAGGACGATGACTCTGAGGACTTCACCGACGAGGACGAAGACGAGTCGGTAGAAGGTGGGTCAAGGGGTCAAAATGGGCACGAGCAAGAAGATGAGGATGACATTAAGGACGGAAATGGTAGGCCGTCGCGGAAGAGAACGAAGAAGGCGGCGTTTTCTGTGTCGTCGCAGATGATGCAGCAATTGAGTGGGGAGGTGACGGGGGTGGTCCAGGACGGAGGGAAGAGCGCGTGCGAGAAAAAGCAGTGGATGAAGACGAGGCTGATGCAGCTGGAACAGCAGCAAGTGAGCTATAAACTGCAAGCGTTTGATCTGGAAAAGCAGAGGCTGAAATGGGCGAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGAGAGCTAAGCTTGAAAATGAGAGGAAGAGGCTCCAAAACGAGAGAATGCTTTTGCTGGTTCGCCAAAAAGAGATTGAATTGTTGAACCTTCAGCATCAACATCTTCAGCAGCAGCATTCTTCTAATTAA 1386 0.5072 MEPNGLGVGMFSSMSSGMLGVETPSQQQQQNLSNPHNLHSNPQMVSYATHHDLEPHPQKPQQSTKHGYPYSTKNKQQTGLSDEDEPGFPADDSSGDPKRKSTSPWQRMKWTDTMVRLLIMAVYYIGDEAGSEGTDPSAKKKPLGLSQKKGKWKSVSMAMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQSLLDTMDLSPKMKEEVRKLLNSKHLFFREMCAYHHSCGHGSISGAPTTQPSPEVGTDQQTPHRPPPPRQQCFHSTGNGLKVGSGEDEDEDDEDDEDDDSEDFTDEDEDESVEGGSRGQNGHEQEDEDDIKDGNGRPSRKRTKKAAFSVSSQMMQQLSGEVTGVVQDGGKSACEKKQWMKTRLMQLEQQQVSYKLQAFDLEKQRLKWARFSSKKEREMERAKLENERKRLQNERMLLLVRQKEIELLNLQHQHLQQQHSSN 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1115 461 Coils Coil 383 403 - -
Dere02g1115 461 Pfam Myb/SANT-like DNA-binding domain 107 233 IPR044822 -
Dere02g1115 461 Gene3D - 110 184 - -
Dere02g1115 461 MobiDBLite consensus disorder prediction 243 349 - -
Dere02g1115 461 PANTHER F16F4.11 PROTEIN-RELATED 5 449 - -
Dere02g1115 461 MobiDBLite consensus disorder prediction 1 105 - -
Dere02g1115 461 MobiDBLite consensus disorder prediction 91 105 - -
Dere02g1115 461 MobiDBLite consensus disorder prediction 285 312 - -
Dere02g1115 461 MobiDBLite consensus disorder prediction 60 77 - -
Dere02g1115 461 MobiDBLite consensus disorder prediction 243 259 - -
Dere02g1115 461 Coils Coil 411 440 - -
Dere02g1115 461 MobiDBLite consensus disorder prediction 313 336 - -
Dere02g1115 461 MobiDBLite consensus disorder prediction 16 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1115 Dere-ChrDere02 10665380 10666765 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dere02g1115 Myb_DNA-bind_4 1e-21 CL0123