Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1110 ATGGTTCAAAGAAAGCAGCCCAGCAAGGTTTATATCCAACTTGATCATGTTAAATCTGATAAGCGCTTGGCGAACTTGAAGCTGTTATCTCAGCACCAAGATAGCAAAGGCAGTGGAGGTGATATGAAGAAGTCAAGGTCAGTTCTGCTTTCTGACATGGAAGCTTCCCAATCATCACCTTCAAAAAGAAGCTTTTCCCAACCAGAAAAGCCACCACATCTTCGTACTCTAATCACTGCCACATCCCCACAAAAGCAGCAGCCATTCATGAGAACAGGTTGGTCACCCCATTACATTAAGCCCACCAGCAATTCAGACGCAAAGAAGGAGCTTTTCCTGGCAAGTCTTCAGAATGCTCTGATTCTGATTATAAGAATCAACTGCCAAAAATTTCCAGTAAATGGAAAGTTAGCCCTGTTCCTGGACTCATTGTTTGCTGCCTGTCTTATCCTTAGTCCTGGCATTACTGAGTCAGATGGAACTTCATTTATGAGGGTTTGCCCATATACGTTTTGCTCTCTTAACGGTCATCATCATGCTCCTTTGCCTCTGCTGAAGAGCTTCTTGTTGGCAAGGAGGCATACTTTGAAGGCCAAGAAGACTATGAAGCAGGAAGCACTAAGCCTTCGAAGATTGAAGGTGCCCTTTAAAACAAAGGATTCTGATATAGAGCAGATTGTGGTTGATAAGCCTGCAGGTGACGATGCAGAAACAGTTATTGAGTCTACAATTGAGGACATATATCAATATTTGACAAGTGTTGAAGAGAATGGTGGAAAATATGAAACATTCATGGATGAGGTCAATTGTGCCACAAAGGTACTTAACGATAGGCTGGAGCACATATCTCCAAAAGATGGTACAAGTATGTCACTGGGTGGCCAAATCTATGATGCTTTTGAACAAGGATGTAAACTAAATCAGGTAGAAAGTGCAACTGATAAAGGTAGAAGGAAACTGCAGATGAAAAATACAGAAATATATCAAGACTTTGCCAAACAACTTATTGGAGGTAATAGTCATGGATGTCAAGGTCATAACAAGATTGATGAGACCAATGAAGACAGAAACTCAAGTGCAGAGACTGATGATGGAAACATCAGCAGAGTGACACAAATTAAATTGTTTGATGCGCATGCAGAAAAATCAGTGCTGTTCAAGACCAGGAATTTATGGAAAAAAAATGAAGGTGAAGCAAATAAGTTCTGTGGCATAAGCAGCACAGCAACTGAGGAGGTTCAACCTGCACAAGCAAATCTTCTGCCCTTGATTCCTGATCCAGAACCAGCAAAGGTCATCCCCAAGCATCAGATGATAAATGAAAGAAAAAGTGCAGAGGAATGGATGCTTGATTACACACTAAGACAAGCTGTCACTAAACTTGCTCAAGTGAGGAAAAGTAAGGTGGCACTGCTGGTTGAAGCTTTTGAAACAGAAATGCCAATACCCAAGTGGCAAGCCCATATGAGAAACAGTTCAGCCTTTGCTCATGCAAAGATCAAAGGTAAGCAACTTCAAGTGCCATTTTATGACAGCAAAGGGAAGACTATCAAGATAACCACAAGAAAGCCAATCTGTGAGAGTTGCAGTCCCATAAGAACAACAAAAAACTTATGCAACTACTTTCCAAAACATGGAGACAAAGCAACTTCAAGCAATAACAGACTGGTGACTGTTCAAGTGAAAACTGAAACTCATTGGTTAGGGGCAGTGAGAGGGCAAAAGAATAGAGATACTGATTCTATCCTTGAACTCAACTATGATATTCATGTGTAA 1776 0.4105 MVQRKQPSKVYIQLDHVKSDKRLANLKLLSQHQDSKGSGGDMKKSRSVLLSDMEASQSSPSKRSFSQPEKPPHLRTLITATSPQKQQPFMRTGWSPHYIKPTSNSDAKKELFLASLQNALILIIRINCQKFPVNGKLALFLDSLFAACLILSPGITESDGTSFMRVCPYTFCSLNGHHHAPLPLLKSFLLARRHTLKAKKTMKQEALSLRRLKVPFKTKDSDIEQIVVDKPAGDDAETVIESTIEDIYQYLTSVEENGGKYETFMDEVNCATKVLNDRLEHISPKDGTSMSLGGQIYDAFEQGCKLNQVESATDKGRRKLQMKNTEIYQDFAKQLIGGNSHGCQGHNKIDETNEDRNSSAETDDGNISRVTQIKLFDAHAEKSVLFKTRNLWKKNEGEANKFCGISSTATEEVQPAQANLLPLIPDPEPAKVIPKHQMINERKSAEEWMLDYTLRQAVTKLAQVRKSKVALLVEAFETEMPIPKWQAHMRNSSAFAHAKIKGKQLQVPFYDSKGKTIKITTRKPICESCSPIRTTKNLCNYFPKHGDKATSSNNRLVTVQVKTETHWLGAVRGQKNRDTDSILELNYDIHV 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1110 591 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 111 IPR044681 GO:0005516
Dere02g1110 591 Pfam Plant calmodulin-binding domain 406 478 IPR012417 GO:0005516
Dere02g1110 591 SMART CaM_binding_2 379 481 IPR012417 GO:0005516
Dere02g1110 591 MobiDBLite consensus disorder prediction 342 365 - -
Dere02g1110 591 MobiDBLite consensus disorder prediction 347 362 - -
Dere02g1110 591 MobiDBLite consensus disorder prediction 50 66 - -
Dere02g1110 591 MobiDBLite consensus disorder prediction 27 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1110 Dere-ChrDere02 10628554 10630980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1110 412 481 Calmodulin-binding Proteins AT2G38800 55.714 3.33e-17 83.2