Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1102 ATGGGGACTACATTTCTTGCTGAACTAGCTGGCACGAATTGCTTGTTTGCTATAAAGGTCGTGGAAAATGAAGTTTTGACAAGAAGGAAGAAGATGTCCAGGGCTGAAATGGAAAAAGACATATTAAGGATGAAGGTAAAAGCCAATCTTGCTGCCCATATCAGATCATTGCCACAACTCATGGCAGAGCCTATTGATGCAAGATCAAATTCTTTTGTTGGTACTCATGAATATGTGGCACCTGAGATCGTCAAAGGAAGGGGACATGGAGCTGCAGTTGATTGGTGGACCTTTGGTGTTTTCTTTATGAACTTTTATATGGTACAACACCCTTTAAAGGTTGTTAAGGTCCTTCTTGCATTAGAATACTTGCACGTGCTTAGAGTTGTTTATCGTGATTTGAAGCCTGAAAACATTCTTGTTCGAGAAGATGGACACATTATGCTTACTGATTTTGACTTGTCACTAAGGTGTGCTGTTAGCCCAAAGCCTGTGGTAGAGCCTATTGATGCAAGATCAAATTCTTTTATTGGTACTTATAAATACGTGGCACTTGAGATCGTCAAAGGAAAGGGACATGGAGCCACAGTTGATTGGTGGACCTTTGGTGTTTTTCTTTATGAACTTTTATACGGTACAACACCCTTTAAAGGTTCTAATGACGAAGAAACATTAGCTAATGTGGTGTCACAAAATTTCAAAGTTCCTGACAGCTCATTTGTTAGTTTCCAAGCTAGGGATCTCATATGA 750 0.3973 MGTTFLAELAGTNCLFAIKVVENEVLTRRKKMSRAEMEKDILRMKVKANLAAHIRSLPQLMAEPIDARSNSFVGTHEYVAPEIVKGRGHGAAVDWWTFGVFFMNFYMVQHPLKVVKVLLALEYLHVLRVVYRDLKPENILVREDGHIMLTDFDLSLRCAVSPKPVVEPIDARSNSFIGTYKYVALEIVKGKGHGATVDWWTFGVFLYELLYGTTPFKGSNDEETLANVVSQNFKVPDSSFVSFQARDLI 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1102 249 Gene3D Transferase(Phosphotransferase) domain 1 115 249 - -
Dere02g1102 249 SUPERFAMILY Protein kinase-like (PK-like) 115 249 IPR011009 -
Dere02g1102 249 ProSiteProfiles Protein kinase domain profile. 1 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1102 249 Pfam Protein kinase domain 115 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1102 249 Pfam Protein kinase domain 69 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1102 249 Gene3D Transferase(Phosphotransferase) domain 1 67 112 - -
Dere02g1102 249 SMART serkin_6 1 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1102 249 SUPERFAMILY Protein kinase-like (PK-like) 1 111 IPR011009 -
Dere02g1102 249 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Dere02g1102 249 PANTHER FLIPPASE KINASE 1-RELATED 55 113 - -
Dere02g1102 249 Gene3D Phosphorylase Kinase; domain 1 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1102 Dere-ChrDere02 10543820 10549296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1102 1 249 AGC Kinase Gene Family AT2G34650 38.333 1.18e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dere02g1102 Pkinase 7.7e-32 CL0016