Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1093 ATGGAACTCTCTCTATTCCGTCATCATCAGTACCATTATACGATCCTCCATTCCCCTCTAAGCTCCATTCTCCCTTCAAGGATAAAACATAAGACACTTTATAACGGAAGTTCACATAGGTTACCCTGCCGGTGCTCATATTCCTCCTCAGATCAATCTGCTGTAGAACCAGCTTCTCTATCTTTGCAGATTGAAGGAAGAAGGGCATTACTCACTGCTCTTCTCACAACTGCTGCCGGAGTTTATGCGTGCGATGTGGCTGGAGCAGTTAGCACTAGTAGAAGAGCACTACGAGGAGAAAAAATTCCGGAAAGTGAATTCAAAACCCTGCCTAGTGGTCTTAAGTATTATGATTTGAAGGTTGGGAGTGGAGCTGAGGCTGTGAAGGGATCCCGTGTTGCTGTTCACTATGTTGCTAAATGGAGGGGTATCACCTTTATGACTAGCAGACAAGGAATGGGTGTCGGAGGAGGAACGCCATATGGATTTGATGTAGGCCAATCTGAGAATGGAACAGTCCTTAAAGGGTTAGATTTAGGGGTAAAAGGCATGCGGATAGGAGGCCAGAGGTTGTTAATTGTTCCTCCCGAACTAGCCTATGGAAGCAAAGGAGTCCAGGAGATCCCTCCAAATGCAACAATAGAGTTAGATGTTGAACTGCTTTCCATCAAACAAAGCCCATTTGGGACTGCGGTAAAGATTATGTCAAGAGGGGAATATCCCACCACCCCAGGCACCCTCTACTCTGGTATTTTGTGTAAATTAACCTGGAATTCTCTTGTTTCTGATCTGGAAATGAAAGAAGAAAACGAAGTGCAAAAGGGTTGGTTGAAGCATGAAAGTGAAATCCTGGGGAATGAGATGCCGCCAGAGAATATTGGTAAGTTGGGGTCCATTGCGTTTGGGCTGGGTTGTGTTTGTTCGCTATCTGGAAAAATGATCATTGAACCAAACATAAGTCGATGCTTCCATTTTAGCTATGTCCTTCTTCTTTTCCTTTTCCTTAGTCATCATTGTACTTCTCAAAAGACTTGCCCAAACTGTGGATCCGTACAAATTCCATATCCTTTAAGCACGGACCCTAGCTGTGGTGATCCTTCCTATAGCCTTCACTGTGATCCCAAATCTAAAAAACTCTGCTTTGTCACCCTCAATGGAAGCTCCTATCCTGTTCTCAGTATCATGTCTCCGATCCAGCGCATGGTGGTGCAGCCATCACCTTGGCTTCCTGGTTCATGTGTTACTCAAGATATGCCTGTAAGTGGGGGCCTTTGGTTAAACCAGTCGCTCCCTTTCAACATAACTTCATCCAACACGGTCTTCCTCTTTAACTGCTCCCCTCGCCTCTTGGTCTCTCCTCTCAATTGCTCTTCTTCTAGTCTTTGTCATCGTTACTTGGAAAGCTCAGGACATGTTGACAATAAGAGAGCACTTCAGTGTGCTAGCGGTCTTGGCCCTTGTTGCACCTTTATTGCAGGAGGGATGCCTTCAGCATACAAGATACGGCTTCATACCTCTGGTTGCAAAGCATTTAGAAGCATCCTTCATTTGGATGTAGAGAAGCCTCCTTCTCAGTGGGAGGAAGGTCTTGAAATTCAATGGACTCCTCCTCCTGAACCTATCTGCAGGACGCAGCAAGATTGCTCTGGAGCTTCTAAATGTTCCCCTGCGGGTAAAAATGGCCTCTTTCGCTGTCTTTGTAAGGGTGGACACCATTGGGACCCTATTGCTGCAACTTGCTTGAAGAAGAAGAAAAACTCTAAATCACAAATCAGCTTGGCGGTCTCAATAGCGGTTGTTACGTTGTTCTGTCTAGCTATAGCTATGGCCATCATCAAAAGGAGGTCCTGGAAGCTTTCTTACCCGTCAAAGAAGGCCAAGACAATAGAAGATGTGATAAAGTCAAGCTCTGGAGAGAAGCTAACTAGGATGTTTCAACTGAAAGAAGTGATGAAAGCAACAAATGGATTTTCTAAAGACAGGATTTTGGGGAACGGTGGGTATGGGGAAGTTTATAGAGGTGAATTTCAAGATGGGACAGTGGTGGCTGTGAAGAAAGCTAGATTGGGCAACCTCAAGAGCACCGAACAGATACTAAACGAGGTTGCCATTCTTTCTCAAGTCAATCACAAGAACCTAGTCAGACTCCTAGGTTGTTGCGTAGAATCAGAGCAGCCTCTGATGATCTATGAGTACATCTCAAACGGGACCCTCCACGACCATCTTCATGGCAGGTATTCCAGCTTCCTAGACTGGAAAACGAGGCTTAAGATTGCTTTTCAAACTGCTGAAGCATTAGCGTATCTTCATTCTGCTGCCCACACTCCCATTTACCATAGAGATGTTAAGTCCACCAACATACTGCTAGATGATGAATTTAACGCCAAAGTGGCGGATTTTGGGCTCTCCAGATTGGCTAACCCAGGACTAAGTCATGTTTCAACCTGTGCTCAGGGCACATTAGGCTACTTGGATCCTGAGTACTACCGCAACTATCAGTTAACTGATAAAAGTGACGTTTATAGTTATGGAGTTGTGCTGCTAGAACTCTTGACTTCCCAGAGAGCCATAGATTTCTCAAGAGAGCAAGATGATGTGAACCTAGCAATTTTTGTGAGTCAACATGCCATCAATGGAACAATCATGGAACTGGTAGATCAGAGGCTCCTAATTCCTACGGAGCCATCTGGTGATAAAGTGAACACAAGTGTAGAACTATTCTTAGAGCTTGCACTCAGCTGTCTGAGGGAGAAGAAAAGTGATAGACCTAGTATGAAGGACATTGTTCAGCAACTTCAGTGCATAATTAGGATTGTAGATCAAGTCAGGAATAGTGATGAAGTATCTGTTTAA 2853 0.4462 MELSLFRHHQYHYTILHSPLSSILPSRIKHKTLYNGSSHRLPCRCSYSSSDQSAVEPASLSLQIEGRRALLTALLTTAAGVYACDVAGAVSTSRRALRGEKIPESEFKTLPSGLKYYDLKVGSGAEAVKGSRVAVHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGQSENGTVLKGLDLGVKGMRIGGQRLLIVPPELAYGSKGVQEIPPNATIELDVELLSIKQSPFGTAVKIMSRGEYPTTPGTLYSGILCKLTWNSLVSDLEMKEENEVQKGWLKHESEILGNEMPPENIGKLGSIAFGLGCVCSLSGKMIIEPNISRCFHFSYVLLLFLFLSHHCTSQKTCPNCGSVQIPYPLSTDPSCGDPSYSLHCDPKSKKLCFVTLNGSSYPVLSIMSPIQRMVVQPSPWLPGSCVTQDMPVSGGLWLNQSLPFNITSSNTVFLFNCSPRLLVSPLNCSSSSLCHRYLESSGHVDNKRALQCASGLGPCCTFIAGGMPSAYKIRLHTSGCKAFRSILHLDVEKPPSQWEEGLEIQWTPPPEPICRTQQDCSGASKCSPAGKNGLFRCLCKGGHHWDPIAATCLKKKKNSKSQISLAVSIAVVTLFCLAIAMAIIKRRSWKLSYPSKKAKTIEDVIKSSSGEKLTRMFQLKEVMKATNGFSKDRILGNGGYGEVYRGEFQDGTVVAVKKARLGNLKSTEQILNEVAILSQVNHKNLVRLLGCCVESEQPLMIYEYISNGTLHDHLHGRYSSFLDWKTRLKIAFQTAEALAYLHSAAHTPIYHRDVKSTNILLDDEFNAKVADFGLSRLANPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQRAIDFSREQDDVNLAIFVSQHAINGTIMELVDQRLLIPTEPSGDKVNTSVELFLELALSCLREKKSDRPSMKDIVQQLQCIIRIVDQVRNSDEVSV 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1093 950 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 327 936 IPR044652 GO:0004672
Dere02g1093 950 Pfam Wall-associated receptor kinase galacturonan-binding 345 399 IPR025287 GO:0030247
Dere02g1093 950 Gene3D - 89 234 IPR046357 GO:0003755
Dere02g1093 950 Pfam Protein kinase domain 658 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1093 950 ProSitePatterns Protein kinases ATP-binding region signature. 663 686 IPR017441 GO:0005524
Dere02g1093 950 SUPERFAMILY FKBP-like 93 224 - -
Dere02g1093 950 FunFam Wall-associated receptor kinase-like 20 733 945 - -
Dere02g1093 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Dere02g1093 950 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 126 221 IPR001179 GO:0003755
Dere02g1093 950 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 130 224 IPR001179 GO:0003755
Dere02g1093 950 Gene3D Transferase(Phosphotransferase) domain 1 733 948 - -
Dere02g1093 950 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 631 732 - -
Dere02g1093 950 Gene3D Phosphorylase Kinase; domain 1 619 732 - -
Dere02g1093 950 ProSiteProfiles Protein kinase domain profile. 657 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1093 950 SMART serkin_6 657 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1093 950 SUPERFAMILY Protein kinase-like (PK-like) 634 932 IPR011009 -
Dere02g1093 950 CDD STKc_IRAK 663 933 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1093 Dere-ChrDere02 10459065 10467097 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1093 345 941 Receptor kinase-like Gene Family AT5G02070 46.965 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Dere02g1093 Pkinase 2e-49 CL0016