Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1063 ATGGGAGATAGAAAGGAAAGGGATAGGATAGTGGAGCACAGGGAGATCCAATCCTGCGAGCCCCAATCCCTTATCTATTTTCTGGCTTTTACACAAGACATTGTCCAATACCAAGGACATGAAGCTAGGCAACGGAAAGTGAAGCAGTGCCTGACGTGCTTTCCGTATCAGAGTGACAGCGATCACCTTCTTATCTTCAACAGTCAACACAGGAAGATGCCCATCCGAAACATAGCCGTCGGTCGGCCGGAGGAGGCCACTCATCCGGACACCTGGAAGGCTGGCCTCGCCGAGTTCTTCTCCACTCTCATCTTCGTCTTCGCCGGCGAAGGCTCAGGCATGGCCTTCAACAAGCTCACCAACAACGGCGCCACCACCCCCGCTGGCCTTATCGCCGCCGCGATCGCACATGCATTCGCTCTTTTTGTTGCGGTCTCCGTGGGCGCCAACATCTCCGGCGGCCACGTCAACCCCGCCGTCACCTTCGGTGCCTTCATCGGCGGAAACATATCCTTCTTACGCGGCATCGTCTACTGGATCGCTCAGCTTCTCGGTTCCACCGTAGCTTGCTTGCTTCTCTGGTTCGTCACTGGAGGACTGAGCACCCCTGCTTTCGGGCTGTCGGCCGGAGTGGGAGTATGGAACGCCGTCGTATTTGAGATCGTGATGACATTCGGGTTGGTGTACACGGTGTATGCGACGGCAATTGATCCGAAGAAGGGGAGCTTGGGGACCATAGCCCCAATCGCGATCGGATTCATTGTTGGAGCGAACATATTGGCGGGTGGGGCGTTCGATGGGGCATCCATGAACCCGGCAGTGTCATTCGGACCAGCCTTGGTGAGCTGGAGCTGGGACAACCACTGGGTCTACTGGGTTGGGCCCCTTATCGGTGGGGGGCTTGCTGGGCTTGTTTATGAGCTCTTCTTCATCATTCAGACTCATGAACCTCTTCCCCCAACAGACTACTAA 972 0.5607 MGDRKERDRIVEHREIQSCEPQSLIYFLAFTQDIVQYQGHEARQRKVKQCLTCFPYQSDSDHLLIFNSQHRKMPIRNIAVGRPEEATHPDTWKAGLAEFFSTLIFVFAGEGSGMAFNKLTNNGATTPAGLIAAAIAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGNISFLRGIVYWIAQLLGSTVACLLLWFVTGGLSTPAFGLSAGVGVWNAVVFEIVMTFGLVYTVYATAIDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGLVYELFFIIQTHEPLPPTDY 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1063 323 Gene3D Glycerol uptake facilitator protein. 76 320 IPR023271 -
Dere02g1063 323 Pfam Major intrinsic protein 86 306 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere02g1063 323 PRINTS Major intrinsic protein family signature 93 112 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere02g1063 323 PRINTS Major intrinsic protein family signature 137 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere02g1063 323 PRINTS Major intrinsic protein family signature 219 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere02g1063 323 PRINTS Major intrinsic protein family signature 289 309 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere02g1063 323 PRINTS Major intrinsic protein family signature 252 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere02g1063 323 PRINTS Major intrinsic protein family signature 174 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere02g1063 323 SUPERFAMILY Aquaporin-like 84 320 IPR023271 -
Dere02g1063 323 ProSitePatterns MIP family signature. 155 163 IPR022357 -
Dere02g1063 323 FunFam Probable aquaporin TIP1-1 76 323 - -
Dere02g1063 323 CDD MIP 93 309 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere02g1063 323 NCBIfam MIP family channel protein 97 306 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere02g1063 323 PANTHER AQUAPORIN-8 78 318 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1063 Dere-ChrDere02 10078718 10080808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1063 73 323 Major Intrinsic Protein MIP AT2G36830 84.064 1.53e-151 424