Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1060 ATGGTGGCCACAGAGTTCACCAGTGGTGGTGGCTGGAGAGAAATGAGAAGCTTCGGCCACCATGTGATCACCGGCCGCTGGTTCATGATCTTCGCGTCACTACTGATCATGGCCGTTGCGGGGGCTACCTATATGTTCAGTTTATACTCTAACGACGTCAAGACCTCATTGGGTTACGACCAGAGCACTCTCAACTTGCTCAGTTTCTTCAAAGACTTGGGTGGCAACACGGGAGTCATATCCGGGTTAATCAACGAGATCACTCCTCCCTGGGTGGTCCTCTCCATGGGAGCCATCATGAACTTCTTCGGCTACTTCATGATCTGGCTCGCCGTCACTGGCCGTACTTCCAAACCCAAGGTTTGGCAGATGTGTCTCTACATCTGCATTGGTGCTAATTCTCAGTCTTTTGCCAACACCGGTGCTTTAGTCACGTGTGTTATGAATTTCCCCGGAAGCCGTGGCAGCGTTCTGGGCCTTCTCAAGGGTTATGTTGGGCTTAGTGGTGCCATTATGACTCAGATTTACCATGCCATCTATGGCGACGATTCCAAATCTCTTATCTTGCTCATTGCTTGGCTTCCTGCTGCTGTTTCCATCTTTTTCCTCCCCACAATTCGGATACTGAACACTATTCGACAACCTAAGGAGCTCAAGGTTTTCTATAATCTTCTTTATATCTCACTTGGCCTAGCTGGGTTCCTCATGGTATTGATCATCGTACAGAACAGGCTGAACTTTTCGAGGATCGGGTACGTGTTCGATGGCATCGTGGTTCTGCTCTTACTTTTTCTCCCACTTGTTGTGGTTTTCAGAGAGGAATTCCCGCTCTGGAGAGCCGGAAAACAAGCCACGACCCATGCTTCCGGATTGAAAGTAGTCACTGAAGCTCCACCTCCAATAACGGAGTTACCGCAGCCGCAGCCGCGGCCAGAATCTTCCACAACCACCCCAAGCTCCGGGAATAAGAGTTCGTGTCTGAGCACGGCTTTTAAACCACCAAACAGAGGAGAGGACCATACCATTTTGCAAGCTATGTTCAGCATTGACATGTTGATTCTGTTCACTGCGACAACTTTCGGTGTCGGTGGAACACTAACTGCTATTGACAACTTGGGACAAATTGCGAAATCCTTGGGATACCCGAGTAAGAGCACCACCACCTTTGTGTCCTTAGTGAGCATATGGAACTATCTGGGGCGAGCAGTCGCTGGTTATGCCTCAGAAATCTTCTTGATCAAATACAAATTCCCTCGTCCTTTAATGCTCTCTCTAGTGATGCTTCTGTCATGCGTTGGCCATCTTCTAATTGCGTTTGGTATCCCCTACTCTCTCTACATGGCATCCTTGATTATTGGGTTTTGCTTCGGAGCACAATGGCCGTTGATGTTTGCGATCATATCTGAAATATTCGGCCTCAAATATTACTCTACTTTGTACAATTTGGGATCAGTGGCGAGCCCAGTGGGAGCTTACATTCTGAACGTGAAAGTGACGGGTTCCTTATACGACAAAGAGGCCTTGAAACAATTGAAGGTAAAGGGGCTCACAAGGAAAGCAGGGGAAGATTTAACTTGCATAGGAGTTCGCTGCTATAGGATGCCCTTCATCATAATCACGGCATCAACGTTTATAGGGTGCTTGGTTTCTTTCATATTAGTGCTTAGGACTAGAAAATTCTACAAAGGCGACATATACAGCAAGTTCAGAGTAGAAGAAGAGACTGAGATGGCCACTACCAAAAGTGGCACAGTTTCGATGGACACAGAATGCCATGGAAATGCAACGCCAAACGGCATTGGGGCCACTCCCGCCGCCACAAGCGGCACAGAAGATTCAGACAAAAACAACAGAAAGTCTAGTGTTTAG 1869 0.4778 MVATEFTSGGGWREMRSFGHHVITGRWFMIFASLLIMAVAGATYMFSLYSNDVKTSLGYDQSTLNLLSFFKDLGGNTGVISGLINEITPPWVVLSMGAIMNFFGYFMIWLAVTGRTSKPKVWQMCLYICIGANSQSFANTGALVTCVMNFPGSRGSVLGLLKGYVGLSGAIMTQIYHAIYGDDSKSLILLIAWLPAAVSIFFLPTIRILNTIRQPKELKVFYNLLYISLGLAGFLMVLIIVQNRLNFSRIGYVFDGIVVLLLLFLPLVVVFREEFPLWRAGKQATTHASGLKVVTEAPPPITELPQPQPRPESSTTTPSSGNKSSCLSTAFKPPNRGEDHTILQAMFSIDMLILFTATTFGVGGTLTAIDNLGQIAKSLGYPSKSTTTFVSLVSIWNYLGRAVAGYASEIFLIKYKFPRPLMLSLVMLLSCVGHLLIAFGIPYSLYMASLIIGFCFGAQWPLMFAIISEIFGLKYYSTLYNLGSVASPVGAYILNVKVTGSLYDKEALKQLKVKGLTRKAGEDLTCIGVRCYRMPFIIITASTFIGCLVSFILVLRTRKFYKGDIYSKFRVEEETEMATTKSGTVSMDTECHGNATPNGIGATPAATSGTEDSDKNNRKSSV 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1060 622 Pfam Nodulin-like 26 271 IPR010658 -
Dere02g1060 622 MobiDBLite consensus disorder prediction 580 622 - -
Dere02g1060 622 MobiDBLite consensus disorder prediction 297 333 - -
Dere02g1060 622 MobiDBLite consensus disorder prediction 308 331 - -
Dere02g1060 622 CDD MFS_Mch1p_like 25 547 - -
Dere02g1060 622 SUPERFAMILY MFS general substrate transporter 26 563 IPR036259 -
Dere02g1060 622 Gene3D MFS general substrate transporter like domains 343 561 IPR036259 -
Dere02g1060 622 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 27 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1060 Dere-ChrDere02 10053628 10055496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1060 15 570 Nodulin-like Gene Family AT2G39210 65.468 0.0 748
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g1060 02 10053628 10055496 Dere01g0317 01 7687821 7689596 ECH
Dere02g1060 02 10053628 10055496 Dere02g1060 02 10053628 10055496 ECH