Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1045 ATGGCGAAATGCTTCGATCCCAAAACTCTGACGTATTCATCGCACAGACCACCCATTCACTTTCCTGCCGATCCCAAGCTCTCACTTGCTTCATTCCTCTTCAATAGCACTTCCACTTTTGCCAACACTCTCGCCCTCATCGATTCGGATTCCGGCGAATCCCTCACCTTCCCCCAGCTCAAAATCCATGTCACTTGGCTCGCCCACTCCTTGTTACGTCTCGGCATCAACAAAGGTGACGTCGTTTTGATATTCGCTCCCAATTCCACGCGTTTCATCGTATGCTTCCTCGCCGTTGTTGCTGTCGGCGCCATCGTCACCACCTGCAATCCTTTATACACCGTCCTCGAGCTTTCAAAACAAATCAAAGATTCTAATCCAAAACTCGTTATTACCGTCGCCGAACTTTTTAACAAAATCGAAGCCTCAAATTTACCGTCCATATTGTTGGATCCTTCGAGCACGGTAAAATTATGCAACACCTCGAAGTCTATGATTTGGTACTACGCTGATTTGATCAGAATGTCAAACGCAAGCTCCGATTTACCGGCGATCAACGTCACGCAGTCCGACGTGGCGGCGCTATTGTACTCGTCAGGCACGACGGGGAGAAGCAAGGGAGTAATTTTAAGGCATCGAAATTTCATCTCGGCGTCATTGGCGGGGACATCAGATCAGGATCGATACGGTGAAATCAACAACGTGTTCCTGTGTTTCTTGCCCATGTATCATGTGTTCGGGCTTTCGGTTATAACGTATTCGCAGCTGCGGAGGGGGAACACGGTGGTGTCAATGAGGAGGTTTGGTTTGGAGAAGGCTCTGGAAGTGGTGGAGAAGTTGAAGGTGACGTACCTGTATGTTGTTCCGCCGGTTATGATTGAGCTGGTGAAGCGGAGGGATTTGCTGAGCAAGTATGACTTGTCGTCACTGAAGCAGCTCGCCGGAGGAGCCGCTCCTCTGGGAAAAGATGTGATGCGGGAGTGTGCTGAATTCCTTCCCCATGTTGAGATTATTCAGGGATATGGCATGACTGAAGCATGCGGAATTATTTCCTTAGAGAATGCAAAAGAAGGATGCTGCCTTTCAGGTTCAACGGGAAAACTGCTTCCAGGCTTTGAATCTCGAATAGTTAATTTAGATACGTCCAAGCCCCTTCCACCCAATCAATTAGGGGAAATTTGGCTTCGTGGACCTTCTATGATGCAAGGATATTTTAACAATCCAGAAGCCACAAAACTGACCATAGATGATCAAGGTTGGGTACGTACAGGAGACCTTGGTTATTTTGATGAAAAGGGACAGCTATTTGTGGTAGATCGAATTAAAGAGCTCATCAAGTGCAATGGGTATCAGGTGGCGCCAGCAGAACTTGAGGACTTGCTGGTTTCTCACCCTGAAATATTAGATGCATGTGTGATCCCATCCCCTGATGCTAAAGCTGGTGAGGTTCCAGTTGCTTATGTAGTTCGCTCACCCAACAGCTTGTTAACGGAAGAAGCCATTCAGAAGATTGTAGCAAAACAGGTTGCACCATACAAAAGGTTAAGGCGAGTCACATTTATAGAGAAGGTTCCAAAGTCATTGACAGGAAAGATTTTACGAAAAGATCTCATGAAAATTGATAGACAAAGACGAACGCCACATGCTTCTCTGACATTTATTGCCCTTTCCTTTCTTTTAGCTCTTTTTCTGCGTTACTTGGAGGAGCACGATGCGGAAGAAATCCCTGCTAGTGGGCCCAAAGTGACACATTGA 1755 0.4678 MAKCFDPKTLTYSSHRPPIHFPADPKLSLASFLFNSTSTFANTLALIDSDSGESLTFPQLKIHVTWLAHSLLRLGINKGDVVLIFAPNSTRFIVCFLAVVAVGAIVTTCNPLYTVLELSKQIKDSNPKLVITVAELFNKIEASNLPSILLDPSSTVKLCNTSKSMIWYYADLIRMSNASSDLPAINVTQSDVAALLYSSGTTGRSKGVILRHRNFISASLAGTSDQDRYGEINNVFLCFLPMYHVFGLSVITYSQLRRGNTVVSMRRFGLEKALEVVEKLKVTYLYVVPPVMIELVKRRDLLSKYDLSSLKQLAGGAAPLGKDVMRECAEFLPHVEIIQGYGMTEACGIISLENAKEGCCLSGSTGKLLPGFESRIVNLDTSKPLPPNQLGEIWLRGPSMMQGYFNNPEATKLTIDDQGWVRTGDLGYFDEKGQLFVVDRIKELIKCNGYQVAPAELEDLLVSHPEILDACVIPSPDAKAGEVPVAYVVRSPNSLLTEEAIQKIVAKQVAPYKRLRRVTFIEKVPKSLTGKILRKDLMKIDRQRRTPHASLTFIALSFLLALFLRYLEEHDAEEIPASGPKVTH 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1045 584 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 538 - -
Dere02g1045 584 FunFam 4-coumarate--CoA ligase 2 443 543 - -
Dere02g1045 584 SUPERFAMILY Acetyl-CoA synthetase-like 21 543 - -
Dere02g1045 584 Gene3D - 10 442 IPR042099 -
Dere02g1045 584 CDD 4CL 21 537 - -
Dere02g1045 584 Gene3D - 443 545 IPR045851 -
Dere02g1045 584 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Dere02g1045 584 Pfam AMP-binding enzyme 38 447 IPR000873 -
Dere02g1045 584 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 442 - -
Dere02g1045 584 Pfam AMP-binding enzyme C-terminal domain 456 531 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1045 Dere-ChrDere02 9916534 9923947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1045 12 544 Monolignol Biosynthesis Gene Families AT4G05160 60.976 0.0 664