Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1044 ATGTCACAAGATTCCGCGGAGATAAAGACGGTTGAGCAGTGGAGATGGTCGGAAATGCAAGGTCTTGAGCTCGTCTCTCCAGCTCCCATTTCTGACCCACACACAACACCAACGCAAACAGAGGAAAACAGAGAGTCGATGCCAATGGAGGCTGCTCAAGAGGGAGAGCGAAGGGAAATTGGAAGTCTCGCTAATGGTGGTGGTGGTGGTGGTAGCAGTAGTGGGGAGAAGCCTGAGAATGTTCCGGCCGTTGGATTTGGCGAGCTTTTCAGATTCGCCGATGGGTTGGATTACATTCTGATGGCAATAGGAACCGTCGGAGCAATTGTGCACGGCTGTTCTTTGCCTCTGTTTCTCCGGTTCTTCGCCGATCTCGTCAATTCTTTTGGGTCGAATGCCAATAATGTGGACAAGATGACCCAGGAAGTCGTTAAGTACGCATTTTACTTCCTGGTGGTGGGTGCTGCTATATGGGCATCATCATGGGCAGAGATATCTTGCTGGATGTGGACTGGCGAGAGGCAATCAACGAAGATGAGGATCAAGTACCTTGAAGCTGCCTTAAACCAGGACATTCAATACTTCGATACCGATGTTAGAACATCTGACGTCGTTTTTGCCATCAACACTGATGCTGTCATGGTCCAAGACGCCATTAGCGAGAAGCTGGGTAACTTCATTCACTACATGGCGACTTTTGTTTCTGGATTTGTGGTGGGTTTCACCGCTGTTTGGCAATTGTCTCTCGTTACCCTCGCTGTAGTCCCTATGATAGCTGTAATAGGAGGTATCCACAACGCCACTTTGGCCAAGCTCTCCGCCAAAAGCCAAGAAGCTCTTTCTAAAGCTGGCAACATCGTGGAACAGACGATCGTGCAAATTCGAGTAGTACTGGCTTTCGTTGGTGAGAGTCGAGCATTACAAGACTACTCTTCGGCGCTGAAGGTAGCCCAAAAGAATGGCTACAAAAGTGGGTTCGCAAAGGGAATGGGATTAGGCGCCACTTACTTTGTCGTTTTCTGCTGTTATGCGCTCCTGCTATGGTACGGAGGCTATCTGGTCAGGCACCACTACACAAATGGCGGGCTTGCCATCTCCACCATGTTTGCTGTTATGATTGGAGGATTGGGTTTGGGACAATCTGCGCCCAGCATCGCTGCAATTACGAAGGCCAGAGTCGCTGCTGCAAAAATTTTCCGAATCATCGATCACAAACCGAGCATAGACCGAAATAGTGATTCGGGTTTGGAATTCGAGTCAGTGACTGGGCTTGTTGAGCTAAAAAATGTAGATTTCTCATACCCATCAAGGCCGGATGTTCGAATCCTCAATAATTTCTCCTTGAATGTGCCGGCCGGCAAGACCATAGCTTTGGTCGGCAGCAGCGGCTCCGGCAAGAGCACCGTCGTCTCCCTCATCGAGAGATTCTACGACCCTACTTCAGGACAAGTCCTGTTAGATGGACATGACGTTAAAACATTGAAGCTGAGATGGCTGAGGCAGCAAATAGGACTTGTAAGCCAAGAGCCTGCTTTATTTGCAACCACTATCAGAGAGAACATACTGTTGGGTAGGCCTGATGCTGACCAAGTTGAAATCGAAGAAGCTGCAAGGGTTGCTAATGCTCATTCGTTTATTATCAAGCTTCCCGAAGGCTATGACACTCAGGTAGGAGAGAGAGGGTTGCAACTCTCAGGAGGGCAAAAGCAGAGAATAGCAATAGCAAGGGCAATGCTAAAGAACCCGGCAATTCTTCTTCTGGATGAGGCAACAAGTGCATTAGACTCTGAGTCTGAAAAGCTGGTGCAAGAAGCCCTTGACCGGTTCATGATCGGTAGAACAACTCTTGTAATTGCTCATCGCCTATCCACCATTCGAAAAGCTGACCTTGTTGCTGTACTTCAGCAAGGAAGTGTTTCTGAAATTGGAACTCATGATGAGCTCTTCTCTAAGGGTGAAAATGGAGTCTATGCCAAGCTTATCCGGATGCAGGAAATGGCGCATGAAACTGCTATGAGTAATGCCAGAAAGAGTAGTGCAAGGCCTTCAAGTGCCAGAAACTCTGTAAGCTCACCAATAATTGCTCGGAATTCTTCTTATGGCCGGTCACCATACTCACGCAGGCTGTCTGACTTCTCTACTTCTGATTTTAGTCTGTCCCTTGATGCTTCACATCCAAATTACAGGCTTGAAAAGCTTGCCTTCAAAGAGCAAGCCAGTTCCTTTTGGCGCCTTGCAAAAATGAATTCTCCTGAGTGGCTTTATGCTTTGATTGGTTCTATCGGCTCTGTCGTTTGCGGATCCCTTAGCGCATTCTTTGCTTATGTTCTCAGTGCTGTCCTCAGTGTCTATTACAATCCAAATCACAGATACATGATCCGAGAAATAGAAAAGTACTGCTACTTGTTGATTGGGCTTTCATCAGCTGCTCTTCTCTTCAATACATTGCAGCACTTCTTCTGGGATATTGTGGGCGAAAACCTTACTAAACGAGTGCGGGAGAAAATGCTTAATGCTGTGCTAAAAAATGAAATGGCATGGTTTGACCAGGAGGAAAATGAGAGTGCTCGGGTTGCAGCAAGGCTCGCGCTTGATGCCAACAATGTCAGATCTGCCATTGGAGATCGGATTTCTGTGATTGTGCAGAACACTGCACTTATGCTAGTTGCCTGTACTGCAGGGTTTGTTTTGCAGTGGCGTCTTGCTCTTGTCCTCATAGCTGTCTTCCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGGGACCTGGAAGCTGCACATGCCAAGGCCACACAACTCGCAGGAGAGGCTATTGCTAACGTAAGAACTGTTGCAGCCTTCAATTCGGAAACAAAAATAGTTGGTCTTTTCACTTCCAACCTTGAAACTCCACTACGCCGCTGCTTTTGGAAGGGACAGATTTCTGGAAGTGGATTTGGGATAGCTCAGTTTGCACTTTATGCTTCCTATGCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCATGGAATCTCTGATTTCTCCAAAACAATCAGAGTCTTTATGGTCCTTATGGTCTCTGCCAATGGTGCTGCTGAAACTTTAACCTTGGCTCCTGACTTCATTAAGGGAGGTCGAGCCATGAGGTCAGTGTTTGATCTTCTTGACCGTAGAACAGAAATTGAACCAGATGACCTAGATGCTACCCCTGTTCCTGATCGTCTTCGTGGGGAAATTGAACTTAAGCACGTAGACTTCTCTTATCCCACTCGCCCAGATATGCCCGTATTTCGTGATCTCTGTCTTCGTGCCAGGGCAGGTAAAACTCTTGCTCTTGTAGGACCTAGTGGCTGTGGCAAGAGCTCAGTGATTGCACTTGTACAGCGATTCTATGATCCAACGTCTGGGCGGGTTATGATTGATGGAAAGGACATTAGAAAATACAATCTCAAGTCCCTCAGACGGCACATTGCCGTTGTACCTCAGGAGCCTTGCCTTTTTGCTTCTACTATATATGAAAACATTGCTTATGGGAATGAGGCAGCAACCGAAGCTGAGATAATTGAAGCAGCAACTCTTGCCAATGCTCACAAGTTCATATCTGCTTTGCCAGACGGATACAAAACTTTTGTTGGGGAAAGAGGAGTTCAACTATCTGGAGGACAAAAGCAGAGAATAGCAATAGCTCGGGCTTTTGTGAGGAAGGCAGAGATTATGCTTCTTGATGAGGCAACAAGTGCACTTGACGCTGAATCTGAGAGGTCTGTTCAAGAGGCTCTAGACCGTGCGTGCTCTGGAAAAACTACTATCATTGTTGCTCACAGGCTATCAACTGTTAGGAATGCCAATGTCATTGCGGTGATCGATGATGGGAAAGTAGCAGAGCAAGGATCCCACTCACAGTTGTTAAAAAATCACCCTGATGGGATATATGCTCGCATGATTCAATTACAAAGGTTCACACACACCCAAGTTATTGGGATGGCCTCTGGTTCAACTTCTGCTAGACCGAAAGATGAAAATGAAAGAGAAGGCTAG 4041 0.4689 MSQDSAEIKTVEQWRWSEMQGLELVSPAPISDPHTTPTQTEENRESMPMEAAQEGERREIGSLANGGGGGGSSSGEKPENVPAVGFGELFRFADGLDYILMAIGTVGAIVHGCSLPLFLRFFADLVNSFGSNANNVDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALNQDIQYFDTDVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLSLVTLAVVPMIAVIGGIHNATLAKLSAKSQEALSKAGNIVEQTIVQIRVVLAFVGESRALQDYSSALKVAQKNGYKSGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAISTMFAVMIGGLGLGQSAPSIAAITKARVAAAKIFRIIDHKPSIDRNSDSGLEFESVTGLVELKNVDFSYPSRPDVRILNNFSLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDVKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPEGYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFSKGENGVYAKLIRMQEMAHETAMSNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYRLEKLAFKEQASSFWRLAKMNSPEWLYALIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPNHRYMIREIEKYCYLLIGLSSAALLFNTLQHFFWDIVGENLTKRVREKMLNAVLKNEMAWFDQEENESARVAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSETKIVGLFTSNLETPLRRCFWKGQISGSGFGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRRTEIEPDDLDATPVPDRLRGEIELKHVDFSYPTRPDMPVFRDLCLRARAGKTLALVGPSGCGKSSVIALVQRFYDPTSGRVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFASTIYENIAYGNEAATEAEIIEAATLANAHKFISALPDGYKTFVGERGVQLSGGQKQRIAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIIVAHRLSTVRNANVIAVIDDGKVAEQGSHSQLLKNHPDGIYARMIQLQRFTHTQVIGMASGSTSARPKDENEREG 1346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1044 1346 SUPERFAMILY ABC transporter transmembrane region 744 1064 IPR036640 GO:0005524|GO:0016020
Dere02g1044 1346 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 757 1044 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere02g1044 1346 Pfam ABC transporter 1101 1247 IPR003439 GO:0005524
Dere02g1044 1346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 416 664 IPR027417 -
Dere02g1044 1346 SUPERFAMILY ABC transporter transmembrane region 89 409 IPR036640 GO:0005524|GO:0016020
Dere02g1044 1346 CDD ABC_6TM_Pgp_ABCB1_D2_like 746 1062 - -
Dere02g1044 1346 ProSitePatterns ABC transporters family signature. 564 578 IPR017871 GO:0005524|GO:0016887
Dere02g1044 1346 CDD ABC_MTABC3_MDL1_MDL2 425 664 - -
Dere02g1044 1346 SMART AAA_5 1107 1299 IPR003593 GO:0016887
Dere02g1044 1346 SMART AAA_5 452 638 IPR003593 GO:0016887
Dere02g1044 1346 FunFam ABC transporter B family member 19 1046 1068 - -
Dere02g1044 1346 Gene3D - 423 688 IPR027417 -
Dere02g1044 1346 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1080 1316 IPR003439 GO:0005524
Dere02g1044 1346 FunFam ABC transporter B family member 1 736 1045 - -
Dere02g1044 1346 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 425 661 IPR003439 GO:0005524
Dere02g1044 1346 PANTHER ABC TRANSPORTER B FAMILY 73 812 IPR039421 -
Dere02g1044 1346 ProSitePatterns ABC transporters family signature. 1219 1233 IPR017871 GO:0005524|GO:0016887
Dere02g1044 1346 FunFam ABC transporter B family member 1 88 422 - -
Dere02g1044 1346 Gene3D - 1071 1326 IPR027417 -
Dere02g1044 1346 MobiDBLite consensus disorder prediction 22 79 - -
Dere02g1044 1346 MobiDBLite consensus disorder prediction 31 46 - -
Dere02g1044 1346 FunFam ABC transporter B family member 1 1070 1320 - -
Dere02g1044 1346 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 102 390 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere02g1044 1346 CDD ABC_MTABC3_MDL1_MDL2 1080 1319 - -
Dere02g1044 1346 CDD ABC_6TM_Pgp_ABCB1_D1_like 101 398 - -
Dere02g1044 1346 Pfam ABC transporter transmembrane region 758 1027 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere02g1044 1346 Pfam ABC transporter transmembrane region 101 374 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere02g1044 1346 Gene3D ABC transporter type 1, transmembrane domain 148 1053 IPR036640 GO:0005524|GO:0016020
Dere02g1044 1346 FunFam ABC transporter B family member 1 415 665 - -
Dere02g1044 1346 Pfam ABC transporter 443 592 IPR003439 GO:0005524
Dere02g1044 1346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1072 1319 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1044 Dere-ChrDere02 9900866 9906898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1044 77 1341 Calmodulin-binding Proteins AT2G36910 88.863 0.0 2313