Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1029 ATGGCCAACGTAGCGGAAGTTACATGTTATAGAGTCCAATCATTTGCAATGAAGTGTTTTTCATTCCACTACGGAGACAAGAAGGATGATCCGAAGAGCATTAAGTCAATTTCGGCTCGGTCCAACAGTTCCACATATGTCGATGGTGATCTGGGAAGATCTGGCTCAGAATTAAATTCTCAGAATGTTTCAGACAATAGCACTGATTCCCTTAGGAGAACCTCATTTCCCAGCTTGTCCCAAAGACCCAGCAACCTGAGAGTGTTTACGGTATCCGAACTGAAATCAGCCACTAAAAATTTTGGTCGTACTGTCATGATCGGAGAGGGTGGGTTTGGCTGTGTCTACAAGGGAATGATCAAGAGTCTAGAGGACCCATCCAGAAAAATTGAAGTTGCAGTTAAGCAACTTGGTAGAAGAGGAACGCAGGGGCATAAGGAATGGGTGACAGAAGTGAATGTTCTGGGCATTGTTGAGCATCCTAATCTTGTGAAACTTGTGGGCTACTGCGCTGATGATGATGAAAGAGGAATCCAGCGGCTTCTGGTTTATGAATATATGCCCAACACAAGTGTGGAACACCATTTATCCCACCGATCAGAGACCCCTCTCTCGTGGATTAGGAGATTAAAAATAGCTCAAGATGCAGCTCGTGGCTTAACATATCTTCATGAAGAAATGGATTTTCAGATAATCTTCAGAGATTTCAAATCTTCAAATATCCTTTTGGATGAGCAGTGGAATGCAAAGCTTTCAGATTTTGGGTTAGCAAGATTGGGCCCATCTGAAGGATTAACCCATGTCTCAACAGCGGTTGTAGGAACAATGGGATATGCAGCTCCTGAATATATTACAACTGGACGTCTTACATCAAAAAGCGATGTGTGGAGCTATGGTGTCTTCCTTTATGAACTCATCACTGGCAGACGTCCTTTGGATCGAAATCGTCCCAAGGGTGAGCAGAAGCTCTTGGATTGGGTAAGGCCATACCTATCAGATAGGAAGAAATTTCAACTAATAGTGGATCCAAGGCTTGACAGGAAGCACCTCTTCAAGTCAGTGCAGAGACTAGCTATTATAGCTAACAGATGCTTGGTCAGAAACCCAAAGAATCGTCCAAAAATGAGTGAGGTATTGGAAATGGTGAATCGGATTGTAGAATCTTCAGCTGCTGCAAGTCCACAGATACCTTTGAAGAGTTTAGCATCGGCTGAAGCTTCCCAGGGCACTGAAACAAAGAACAAGAGAAGGATTATGGATCTGAAACCTGGAGAAAATAGTTGGTTTGTTTGGTTGTGGAGACCAAAGCTTCTGAGAGTATGCTGA 1326 0.4344 MANVAEVTCYRVQSFAMKCFSFHYGDKKDDPKSIKSISARSNSSTYVDGDLGRSGSELNSQNVSDNSTDSLRRTSFPSLSQRPSNLRVFTVSELKSATKNFGRTVMIGEGGFGCVYKGMIKSLEDPSRKIEVAVKQLGRRGTQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLVYEYMPNTSVEHHLSHRSETPLSWIRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSEGLTHVSTAVVGTMGYAAPEYITTGRLTSKSDVWSYGVFLYELITGRRPLDRNRPKGEQKLLDWVRPYLSDRKKFQLIVDPRLDRKHLFKSVQRLAIIANRCLVRNPKNRPKMSEVLEMVNRIVESSAAASPQIPLKSLASAEASQGTETKNKRRIMDLKPGENSWFVWLWRPKLLRVC 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1029 441 FunFam Serine/threonine-protein kinase BIK1 67 186 - -
Dere02g1029 441 MobiDBLite consensus disorder prediction 28 79 - -
Dere02g1029 441 Pfam Protein tyrosine and serine/threonine kinase 106 380 IPR001245 GO:0004672|GO:0006468
Dere02g1029 441 ProSitePatterns Protein kinases ATP-binding region signature. 107 135 IPR017441 GO:0005524
Dere02g1029 441 ProSiteProfiles Protein kinase domain profile. 101 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1029 441 Gene3D Phosphorylase Kinase; domain 1 74 186 - -
Dere02g1029 441 MobiDBLite consensus disorder prediction 36 79 - -
Dere02g1029 441 CDD STKc_IRAK 107 385 - -
Dere02g1029 441 Gene3D Transferase(Phosphotransferase) domain 1 187 400 - -
Dere02g1029 441 FunFam Serine/threonine-protein kinase PCRK2 187 395 - -
Dere02g1029 441 SUPERFAMILY Protein kinase-like (PK-like) 75 382 IPR011009 -
Dere02g1029 441 PANTHER OS01G0588500 PROTEIN-RELATED 64 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1029 Dere-ChrDere02 9723198 9726701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1029 17 379 Glycoside Hydrolase AT3G07070 43.164 9.19e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dere02g1029 PK_Tyr_Ser-Thr 5.4e-48 CL0016