Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1020 ATGGAAACGATCGCTAACGTCAATGCCTCCACCGAGAGCTTCTGCCTGAGCAGCGGAGGAGCCGCTGTCGACCCACTCAACTGGGGTGTAGCCGCTGAGTCACTCAAGGGCAGCCACTTGGACGAGGTGAAGCGCATGGTGGCTGAGTTCCGGAAGCCGGTGGTGCGCCTCGGTGGCGAGACCCTCACCATCGCACAGGTGGCCGCCATCGCCGCCCATGACCAAGGTGTCAAGGTGGAGCTGTCGGAGTCGTCCAGGGCTGGCGTTAAGGCCAGCAGTGACTGGGTTATGGATAGCATGAACAAGGGCACCGATAGTTACGGTGTCACCACCGGCTTCGGTGCTACGTCCCATAGGCGAACCAAACAAGGTGCTGCTTTGCAGAAAGAGCTTATTAGATTTTTGAACGCTGGAATATTTGGCAACGGCACAGAGTCATGCCACACTCTGCCACACTCAGCAACCAGAGCAGCGATGCTGGTGAGAATCAACACTCTGCTGCAAGGATACTCGGGCATTCGATTCGAAATCCTAGAAGCCATCACCAAGTTCCTCAACCACAACATCACTCCATGCTTGCCTCTTCGAGGCACGATCACAGCCTCTGGCGATCTCGTCCCTCTTTCTTACATCGCCGGTTTGCTGACCGGCAGACCCAACTCCAAAGCCGTTGGACCCTCCGGAGAAGTCCTTACTCCCAAGGAAGCTTTCCAATTGGCTGGCGTCGATTCTGACTTCTTCGAATTGCAGCCCAAGGAAGGCCTCGCTCTCGTAAACGGCACTGCCGTGGGCTCTGGCTTAGCCTCTATGGTTCTTTTTGAGGCCAACGTCTTGGCTGTCTTGTCTGAAGTTATATCAGCAATTTTCGCTGAAGTGATGCAAGGGAAGCCTGAATTTACAGACCATTTGACGCACAAGTTGAAGCACCACCCTGGCCAAATTGAGGCTGCCGCTATTATGGAACACATTTTGGATGGAAGCTCCTACGTTAAAGCTGCCCAGAAGTTGCACGAGATCGATCCCCTGCAGAAGCCCAAACAAGATCGCTATGCCCTTCGAACTTCACCCCAGTGGCTTGGTCCTCTCGTTGAAGTAATCAGATTTTCCACCAAATCAATTGAGAGGGAGATCAACTCTGTAAACGACAACCCTTTAATTGACGTTTCAAGGAACAAGGCCTTGCACGGTGGTAATTTCCAGGGAACCCCAATTGGAGTCTCCATGGACAACACTCGTTTGGCCCTCGCATCCATTGGGAAACTCATGTTTGCCCAATTTTCTGAGCTGGTCAATGATTTCTACAACAATGGGTTACCCTCGAATCTCTCTGCTAGCAGCAACCCCAGCCTGGACTATGGTTTCAAGGGTGCTGAAATCGCCATGGCATCTTACTGCTCTGAACTTCAATATCTTGCAAACCCAGTGACAAGCCACGTCCAGAGTGCCGAGCAGCACAACCAAGATGTGAACTCGTTGGGTTTGATTTCATCTAGAAAAACCAACGAAGCTATTGAGATCCTGAAGCTCATGTCTTCCACATTCCTAATTGCGCTTTGCCAAGCGATTGACTTGAGGCATTTGGAGGAGAATTTGAAGAGCACGGTGAAGAGCACAGTAAGTCAAGTTGCCAAGAGAACTCTTACCACAGGCGTCAACGGAGAACTCCATCCTTCCAGATTCTGTGAGAAAGATTTGCTCAAAGTGGTCGATAGGGAGTATGTATTTGCCTATATCGATGACCCCACCAGCGCTACATACCCATTGATGCAAAAACTAAGGCAAGTTCTCGTGGATCACGCATTAGCAAATGCCGATAACGAGAGGAACTCCAACACATCAATCTTCCAGAAGATTGCTACTTTCGAGGAGGAGTTGAAGATTGTCTTGCCAAAGGAGGTTGAAAGCGCAAGAAGTGCATACGAGAACGGCAATTCAGCAGTTCCAAACAAGATCAAGGAATGCAGGTCCTACCCATTGTACAAGTTTGTGAGAGAGGAATTGGGGACTGGGTTGCTCACTGGAGAAAAGACCAGGTCACCAGGTGAGGAGTGTGACAAAGTGTTCACTGCTTTGTGTCAGGGTAAGATTATTGATCCTCTTCTGGAATGCCTTGGGGAGTGGAATGGGGCCCCTCTTCCAATCTGCTAG 2148 0.507 METIANVNASTESFCLSSGGAAVDPLNWGVAAESLKGSHLDEVKRMVAEFRKPVVRLGGETLTIAQVAAIAAHDQGVKVELSESSRAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGAALQKELIRFLNAGIFGNGTESCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEVLTPKEAFQLAGVDSDFFELQPKEGLALVNGTAVGSGLASMVLFEANVLAVLSEVISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEIDPLQKPKQDRYALRTSPQWLGPLVEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASSNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKSTVKSTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYIDDPTSATYPLMQKLRQVLVDHALANADNERNSNTSIFQKIATFEEELKIVLPKEVESARSAYENGNSAVPNKIKECRSYPLYKFVREELGTGLLTGEKTRSPGEECDKVFTALCQGKIIDPLLECLGEWNGAPLPIC 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1020 715 FunFam Phenylalanine ammonia-lyase 262 569 - -
Dere02g1020 715 CDD PAL-HAL 60 525 IPR001106 -
Dere02g1020 715 Gene3D - 528 649 IPR023144 -
Dere02g1020 715 Pfam Aromatic amino acid lyase 62 535 IPR001106 -
Dere02g1020 715 Gene3D - 17 261 IPR024083 -
Dere02g1020 715 FunFam Phenylalanine ammonia-lyase 17 261 - -
Dere02g1020 715 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 197 213 IPR022313 GO:0016841
Dere02g1020 715 PANTHER HISTIDINE AMMONIA-LYASE 20 715 IPR001106 -
Dere02g1020 715 FunFam Phenylalanine ammonia-lyase 528 649 - -
Dere02g1020 715 NCBIfam phenylalanine ammonia-lyase 24 704 IPR005922 GO:0005737|GO:0006559|GO:0016841
Dere02g1020 715 SUPERFAMILY L-aspartase-like 24 715 IPR008948 GO:0003824
Dere02g1020 715 Gene3D Fumarase/aspartase (Central domain) 262 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1020 Dere-ChrDere02 9667592 9670441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1020 22 715 Monolignol Biosynthesis Gene Families AT2G37040 84.870 0.0 1255