Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1007 ATGTTATTTTTCTACTTGCTTCTCATCATCGGTCAAAGACCAAACCAGGCAAGGTTTGACCTTACTGGATCCCTGTTAACTTGGTCCGATTTTGATGCGTTAGAAAGAGAGAATGATGGAACTTTTCGTGTGTTCACGTACAATGAATTAAAATCTGCCACTCGGGGTTTTCATTCGTCCGACAAGGTTGGGGAGGGCGGATTTGGCACTGTGTACAAGGGGCGGCTCCGGGATGGCTCATTTGTGGCTGTCAAAGTGCTTTCGATCGAGCTGGATTCCATGCGTGGAGAGAAGGAGTTTGTGGCGGAATTGGGTACGCTTGCCGAAATCAAGCACGAAAATCTAGTCATTCTTCGAGGGTGTTGTGTGGAAGGAGCTTACAGATATTTAGTCTACGAGTACATGGAAAACAACAGCCTTCACCACTTTTTCTTAGGTTCAAAGGAGAGCAGGAAGAGATTCACCTGGGAATCAAGGAGGGATGTAGCCATAGGAGTGGCGCGTGGGCTTGCCTATCTTCATGAGGAAATTAAGCCCTATGTTGTGCACAGAGACATCAAAGCCAGAAATATACTTCTTGACCAAAATTTGACGCCAAAAGTTTCAGACTTTGGTTTGGCAAAGTTACTGATAGATGACAAGTCTTACATCAGTACCCAAGTTGCAGGGACATTGGGTTATCTTGCTCCAGAATATGCCAGTTCAGGAAAGGTGACACGAAAATCAGATGTTTATAGCTTTGGAGTGTTACTCCTCGAAATTGTCAGCGGCCGACCAGTGGTAGATCCTTATGTAGACAAGGAACGTTTCCTAGTTGAGATGGCGTGGGCAGCGCATGAAGCCAATGATTTAGTGAAAATGGTGGATCCTGAGATGAATGACAACTTTCCACAGGAAGAATCCATGCGATTCCTGAAGGTGGGGCTGCTTTGCGTGCAAGAAACCGCCAAGCATCGGCCACGAATGACAGAGGTTGTAGAAATGTTGACAAACAAGATTGAATTGGAAAGCCTTGGTATTTCAAAGCCAGGGGTTGTTGCTGATCTACGGGACATCAAAATTAGGGACCAACTCCAAGCTTCAAGCTCTAGTGGAGCAACCTATGCAAACTCCATTTGGAGTTCCGCTAACCTAGCCCGTTAG 1143 0.4593 MLFFYLLLIIGQRPNQARFDLTGSLLTWSDFDALERENDGTFRVFTYNELKSATRGFHSSDKVGEGGFGTVYKGRLRDGSFVAVKVLSIELDSMRGEKEFVAELGTLAEIKHENLVILRGCCVEGAYRYLVYEYMENNSLHHFFLGSKESRKRFTWESRRDVAIGVARGLAYLHEEIKPYVVHRDIKARNILLDQNLTPKVSDFGLAKLLIDDKSYISTQVAGTLGYLAPEYASSGKVTRKSDVYSFGVLLLEIVSGRPVVDPYVDKERFLVEMAWAAHEANDLVKMVDPEMNDNFPQEESMRFLKVGLLCVQETAKHRPRMTEVVEMLTNKIELESLGISKPGVVADLRDIKIRDQLQASSSSGATYANSIWSSANLAR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1007 380 Pfam Protein tyrosine and serine/threonine kinase 59 329 IPR001245 GO:0004672|GO:0006468
Dere02g1007 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Dere02g1007 380 ProSiteProfiles Protein kinase domain profile. 57 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1007 380 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 41 374 - -
Dere02g1007 380 CDD STKc_IRAK 63 331 - -
Dere02g1007 380 Gene3D Transferase(Phosphotransferase) domain 1 135 339 - -
Dere02g1007 380 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Dere02g1007 380 FunFam Serine/threonine-protein kinase receptor 29 134 - -
Dere02g1007 380 SUPERFAMILY Protein kinase-like (PK-like) 40 334 IPR011009 -
Dere02g1007 380 SMART serkin_6 57 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1007 380 FunFam Putative LRR receptor-like serine/threonine-protein kinase 135 340 - -
Dere02g1007 380 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1007 Dere-ChrDere02 9468933 9470676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1007 44 348 Receptor kinase-like Gene Family AT1G56120 50.980 4.47e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere02g1007 PK_Tyr_Ser-Thr 1.6e-51 CL0016