Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0994 ATGAGCGTCATCGACATTTTAACCCGGGTTGATTCGATCTGTAAGAAGTACGACAAATACGATGTCGACAAGCAAAAGGAGTCTAATGTCTCTGGCGACGATGCCTTTGCTCGACTCTACGCCGTGGTTGACGCTGACATCGAAGCTGCTCTACAGAAAGCAGAAACCGCTTCCAAGGAGAAAAATAGGGCATCTGCCGTAGCGATCAACGCAGAGCTTCGTCGTACCAAGGCTCGGTTGCTGGAGGAGGTCCCTAAGTTGCAGCGATTGGCGCTAAAAAAGGTAAAGGGACTCTCATCAGAAGAATTTGCTGCCCGTAACGATTTGGTTCTTGCATTGCCAGACAGGATCCAAGCTATCCCAGATGGGACTCCTGCTGCCCCCAAAAAGACGGGAGGTTGGGTAGCTTCTGCTTCACGTACTGAAATTAAATTTGATTCAGATGGGCAATTTGACAGTGAACACTTCCAGCAAACTGAGGAATCAAGTCAATTCAGGCAGGAGTATGAAATGCGTAGGATGAAGCAGGATCAAGGTTTGGAAGTGATCTCAGAAGGATTGGATACATTGAAAGACATGGCACATGATATGAATGAGGAACTGGACAGACAAGTTCCACTGATGGATGAGATTGACACCAAGGTGGACAAGGCGTCCTCTGACCTTAAGAATACTAATGTCAGACTTAAAGACACAGTTAATCAGCTTCGATCCAGTCGAAACTTCTGTATCGATATTGTTTTGTTGATTATAATTCTGGGAATTGCTGCCTATTTATACAATGTACTAAAGAAATGA 798 0.4511 MSVIDILTRVDSICKKYDKYDVDKQKESNVSGDDAFARLYAVVDADIEAALQKAETASKEKNRASAVAINAELRRTKARLLEEVPKLQRLALKKVKGLSSEEFAARNDLVLALPDRIQAIPDGTPAAPKKTGGWVASASRTEIKFDSDGQFDSEHFQQTEESSQFRQEYEMRRMKQDQGLEVISEGLDTLKDMAHDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0994 265 Pfam SNARE domain 207 256 IPR000727 -
Dere02g0994 265 Gene3D - 170 231 - -
Dere02g0994 265 FunFam Putative syntaxin-71-like 170 231 - -
Dere02g0994 265 Coils Coil 47 67 - -
Dere02g0994 265 Coils Coil 70 90 - -
Dere02g0994 265 CDD SNARE_Qc 175 230 - -
Dere02g0994 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Dere02g0994 265 PANTHER SYNTAXIN 45 252 IPR045242 -
Dere02g0994 265 SMART tSNARE_6 165 232 IPR000727 -
Dere02g0994 265 SUPERFAMILY SNARE fusion complex 163 230 - -
Dere02g0994 265 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0994 Dere-ChrDere02 9364293 9367858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0994 1 264 SNARE and Associated Proteins AT3G09740 78.195 3.32e-157 436