Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0991 ATGTCCTGTATTCAGTTTACAATAATGAGGGGAATTCCTAATTTCTATTTTCAAAAAGGCTACCCTGTGGGAGTTGTGACATCTGACCCTACATGCTTTCACACGTTTATGGGTCATAGACATTTGTATAGCACATCTCAAATGTTTGAAAATGAGCATGACCAAAATTGGAATCCTATGCATACGGATCAACATTTTGTGAGCCTTGGTAGAGGTAGTCCTTCAGAGAATGGTTCGTTTATTTATCCTGTGGAAAATATGTCTGCAGATGGCATTTCTTTTGCCTCTAATTGGAACTCTGCCACAAGGTCAAATGGATTTGCATCCTCAGGTCTCAATATTGAAGTACCCCCTCTTCAATCAGATGCAGCAAGCACTTCTCACGATCATTTTCAGCATTCATCTAGTGCTGGAGCCTTTTTTGCGGTTTCTGAAAATTATGCTCATCAGCCTTCTTCCTCCAATTATGATAGACAGGCATTTCATGTCGTTGATGGTGGATTTATTGATCTTACAATGGGAAGTGGAAGAGGGCCTCACAAGCGAAAGAGCCCCGGAATTCCTCCAGTCTGTGAGAGAGGCAGTACAAGCAGATACTTCAATGCTGGAAGTTCAACTGATCTTCCTATTTCTTCAGAATTACAGCAGGAGAAGCCAAGTATGGATTCTCAATATTTGCCTTGGGATCAAGTTACCATGCCACCAACATTCAGAGGTAGTGGCCTGTCAATCAGGGGTGAGGGTTCCTTAAGAAATGTGAGAAGCCGTTCTGCACTTGATTTTGAATCCAACCTGGCTAGAACCCATTTAGCCAGCAATCATTCACACAACTACCCTACTGGTCCGCTCATTGACCATTCTAGCACAGTGGAACTCTCAGGTCAGAATTCTAGCACATTAACAAGGGATTGGAACCAAATGAGCATATCTCATGCTCACGGTAGGGTGTTATTACCAGATACAGGCGCTCCTAGTTGTGAGACCAGTCACTTCCTTGTTGGAAGTAGTGCTAGTAATGCCTCTGTAGATGTTGGGGGTTACCATCATGAATTTGGTACAAGCAGAAATCCTATTGTTGCAGAGAGTTTTCATAATAATCTGACTCAGAATACTAGGGGAGTGCGCAGTAACTTTTCACAAAGGTCTACTCCACCTATTAGGACTTCTGCAAGCTTGTGCTTGGGACATGTGGCACCTTCAGATGATGGATTGCAAATGGTTGCTGAAAGTTACTCTTCAAGACATCCAAGGCCGTTAACAACCATTGGCTGGCGGAACAGTGACAGAAATGGGAGGTCAAGGATATCTAGTGATAGATATCGACCATTGGCTGATGCGGCTGGTCTCCACAATCGATTTTCCTCTGAGGGTTTCATGATTGTTGATCGCACGCTACCATATGGTTCTAGAGGTATGGTTGATCAGCATAGAGACATGAGGATGGACATAGATAATATGGGTTATGAGGAACTACTTGCACTTGGAGAGAGGATTGGCCATGTCAGCACAGGGTTGTCTGATGATCTGATTTCAAAATGTTTGACAGAAACAATATTTTGTTCATCTGAGCAAAGTCAGGAGGAAGGAACTTGTGTTATCTGTTTGGAAGAATACAAGAATATGGATGATGTCGGGACGCTGAAAACTTGTTGTCATGACTATCATGTGAGCTGCATTAGAAAGTGGTTATCTATGAAGAACACATGCCCAATCTGCAAAGGTTGTGCTTTGCCTGAAAATATGAAGGATAAATAA 1755 0.4262 MSCIQFTIMRGIPNFYFQKGYPVGVVTSDPTCFHTFMGHRHLYSTSQMFENEHDQNWNPMHTDQHFVSLGRGSPSENGSFIYPVENMSADGISFASNWNSATRSNGFASSGLNIEVPPLQSDAASTSHDHFQHSSSAGAFFAVSENYAHQPSSSNYDRQAFHVVDGGFIDLTMGSGRGPHKRKSPGIPPVCERGSTSRYFNAGSSTDLPISSELQQEKPSMDSQYLPWDQVTMPPTFRGSGLSIRGEGSLRNVRSRSALDFESNLARTHLASNHSHNYPTGPLIDHSSTVELSGQNSSTLTRDWNQMSISHAHGRVLLPDTGAPSCETSHFLVGSSASNASVDVGGYHHEFGTSRNPIVAESFHNNLTQNTRGVRSNFSQRSTPPIRTSASLCLGHVAPSDDGLQMVAESYSSRHPRPLTTIGWRNSDRNGRSRISSDRYRPLADAAGLHNRFSSEGFMIVDRTLPYGSRGMVDQHRDMRMDIDNMGYEELLALGERIGHVSTGLSDDLISKCLTETIFCSSEQSQEEGTCVICLEEYKNMDDVGTLKTCCHDYHVSCIRKWLSMKNTCPICKGCALPENMKDK 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0991 584 ProSiteProfiles Zinc finger RING-type profile. 531 573 IPR001841 -
Dere02g0991 584 MobiDBLite consensus disorder prediction 174 194 - -
Dere02g0991 584 MobiDBLite consensus disorder prediction 273 297 - -
Dere02g0991 584 CDD RING-H2_RNF24-like 529 573 - -
Dere02g0991 584 SMART ring_2 531 572 IPR001841 -
Dere02g0991 584 FunFam E3 ubiquitin-protein ligase MBR2 isoform A 496 577 - -
Dere02g0991 584 SUPERFAMILY RING/U-box 521 575 - -
Dere02g0991 584 Pfam Ring finger domain 530 573 IPR001841 -
Dere02g0991 584 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 497 576 IPR013083 -
Dere02g0991 584 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 133 577 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0991 Dere-ChrDere02 9332105 9335401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0991 37 583 C3H Transcription Factor Family AT2G37150 42.705 8.90e-120 363