Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0977 ATGCCTTGGAAATTTGGTCAGATCAATAATCCTACCCCACCACAGCAATCACCACTTGGGGAGAGAGACAGTCTGGTGCAACTATATTTGAGATCTGCCACTTCTGGGTTTAAGTTCAGTATTCAGCTGAGTCTCGACCAATTGAGGAATGCCAAGAAGATGGGGAGGAAGGGAAATTGGTTTTCTACTGTGAAGAAAGCTCTCAGTCCTGAGTCAAAGAAGAGGGAAGATCAGAAACCAAATAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAGACTTCAGACTCGTATTTGGAAACTGATAAAGCGCCACCTCTTCCTCCACCTGCAGAGACTAAATTAACTAATATTGAGAATGAAAACAATCATGCTCCTGATGTTGAAGTTGCAACTGCTGCGGTTGCTGAGGAACCTGTTCCTGCTATTCAGACACCACCTGTTCCAGTTCAAGTTGCTGTAACTCCTCGGTTTGCTGAGAAATTCAATGCAGAAGTGGCAGCAATTAAGATTCAAACAGCATTTCGAGGATACTTGGCAAGAAGAGCATTGCGGGCTTTAAGAGGGCTGGTAAGGTTGAAATCTCTGATGGAAGGGCCAGTTGTAAGACGCCAAGCCACTAGTACCCTTCGCTCCATGCAGATTCTGGCCCATGTGCAATCTCAGATTCGTTCTAGAAGGATCAGAATGTTAGAGGAGAATCAGGCTCTTCAGAGACAGTTCTTGCAGAAGCATGCCAAAGAGCTTTGCTTGCAGATGGGAGATGAATGGGATGACAGCCTACAATCAAAGGAACAAATTGAAGCCAAGTTACTGAGCAAGTATGAGGCCACTGTGAGGAGAGAAAGAGCACTGGCTTATGCATTCTCTCACCAGCAAAATGGGAAGAGTTCATCTAGATCTGTAAACCCAGTATTCATGGATCCAACCAATCCGGCATGGGGTTGGAGCTGGTTGGAGCGATGGTTGGCTGCCCGGCCCTGGGAGAGCAAAGAGGTTAACGATCAGTCATCTGTCAAAAGCTCAAGCCGCAGCATCACTGCCGGTGAAATCAGCAAATCCTATGCTCGTTACCAGCTTAATTCTGAAAAGCACTCTCCAACAGCCAGCCAAAACCTAGGCTCTCCTAGCTTTCACTCCCACTCAACTCCTTCCAAGCCACCAGCTTCTTCTGCAACAGTTCCCAGGAAACTGAAGAAAGTGAGCCCCAAGGACACCTGGGTTGCTGATGATGACTCTAAGAGCACAGTCAGTGTGCAGTCTGCCTTCCGGAGGCACTCCATTGCTGGATCATCAGTAAGAGATGATGAGAGCCTTGCGAGTTCCCCTGCAGTTCCAAGTTACATGGTGCCAACTCAGTCTGCAAAAGCCAAGTCCAAGACACAGAGTCCGTTAGCCATAGAAAATGGAACAGTAGAGAAGGCATCCTCTGGGACGGTGAAGAAGCGGCTTTCCTTCCCTCCTTCACCGGCCAGGCCAAGACGACATTCAGGTCCACCAAAGGTAGAAAGCAGCTTCAGTGCAGAGGTCACCGTGGGTAATGATGTAGCTGGTTGA 1560 0.4769 MPWKFGQINNPTPPQQSPLGERDSLVQLYLRSATSGFKFSIQLSLDQLRNAKKMGRKGNWFSTVKKALSPESKKREDQKPNKSKKKWFGKQKLQTSDSYLETDKAPPLPPPAETKLTNIENENNHAPDVEVATAAVAEEPVPAIQTPPVPVQVAVTPRFAEKFNAEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMEGPVVRRQATSTLRSMQILAHVQSQIRSRRIRMLEENQALQRQFLQKHAKELCLQMGDEWDDSLQSKEQIEAKLLSKYEATVRRERALAYAFSHQQNGKSSSRSVNPVFMDPTNPAWGWSWLERWLAARPWESKEVNDQSSVKSSSRSITAGEISKSYARYQLNSEKHSPTASQNLGSPSFHSHSTPSKPPASSATVPRKLKKVSPKDTWVADDDSKSTVSVQSAFRRHSIAGSSVRDDESLASSPAVPSYMVPTQSAKAKSKTQSPLAIENGTVEKASSGTVKKRLSFPPSPARPRRHSGPPKVESSFSAEVTVGNDVAG 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0977 519 MobiDBLite consensus disorder prediction 1 21 - -
Dere02g0977 519 MobiDBLite consensus disorder prediction 413 428 - -
Dere02g0977 519 Pfam IQ calmodulin-binding motif 168 186 IPR000048 GO:0005515
Dere02g0977 519 SMART iq_5 164 186 IPR000048 GO:0005515
Dere02g0977 519 ProSiteProfiles IQ motif profile. 165 193 IPR000048 GO:0005515
Dere02g0977 519 MobiDBLite consensus disorder prediction 65 111 - -
Dere02g0977 519 MobiDBLite consensus disorder prediction 446 479 - -
Dere02g0977 519 MobiDBLite consensus disorder prediction 363 519 - -
Dere02g0977 519 MobiDBLite consensus disorder prediction 68 84 - -
Dere02g0977 519 MobiDBLite consensus disorder prediction 363 391 - -
Dere02g0977 519 Gene3D - 158 190 - -
Dere02g0977 519 PANTHER IQ-DOMAIN 5-RELATED 54 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0977 Dere-ChrDere02 9252960 9258200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0977 54 518 IQD Protein Family AT5G03040 52.113 4.98e-139 407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2909 01 43795851 43800887 Dere02g0977 02 9252960 9258200 CCT
Dere02g0977 02 9252960 9258200 Dere02g0977 02 9252960 9258200 ECH