Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0967 ATGGTTCCATACACGAGTCCGCCACTTTTTGCTTGCCCAATGGATAGTTCTGGAAGCTTTAATTCCTCCGTCGTCAATGCTGATGCATCCACCAACACTTGTGACGGCGATTCTTGCTCTTGTGGCGATTCTTTTGCTTATAACTTCGGTATACTGAAGAAGAACCCTGTAGATGATGGCATGAGCTCCGAAGCAGTTGAAATTTCACAAGCCGAAGGTGATAATGCCTGTATTCGGACCGTCCAGCTTTTTCCTGGAGATAACGATTTGACTGAGTTGGAAATCGGTCATCGGTTTCCTGGTTCTTCAACGAAGGGTTGGTTGGATTTCTCGCGCAAGGAGATATGTAGCGGTGGAGAGCAGGGGCTAAAGAAGCTTCCCCAGCTGCAGCAGAGACAGCAGGTCAAGAAGAGCCGGCGAGGACCGAGGTCGCGGAGCTCGGAATATCGTGGCGTTACTTTCTATCGAAGAACGGGAAGATGGGAATCGCACATTTGGGATTGTGGGAAACAAGTGTACTTGGGTGGATTTGATACAGCTCATGCTGCAGCGAGGGCATATGATCGAGCTGCAATCAAGTTCCGTGGCTTTGATGCAGATATCAATTTCAACATCGTTGATTACGATGATGATATAAAGCAGATGAGTAACTTCACAAAGGAAGAGTTTGTGCAAATTCTTCGTCGACAGAGCACCGGCTTTTCAAGGGGAAGCTCAAAATACAGGGGAGTTACTCTGCATAAATGTGGGCGATGGGAGGCTCGCATGGGACAGTTTCTTGGGAAAAAGTATATATATCTTGGGCTATTCGATAGCGAAATAGAGGCTGCAAGGGCATATGACAAGGCTGCCATAAAATGCAATGGAAGGGAGGCAGTTACAAACTTCGAGCCGAGCACATACGAACGGGAGATAATATCTAAGGCTAACAATGAAGATAGCAATCAAAATCTGGATCTGAACTTGGGGATAGCTCCTCCTTGTTCCTCTGATAGTCAAATGGAGAACTCAAAACATGTGAGCAGTTTCCAAGTTCAACATGACTGGGATGACTTGCCTAATGATGGAAGAATTACGTTTGAGCTCTCTGCTTCAAGATTATCGAAGGCTCAACCGTCTCGTGGCATCTCTGCAGCTTCTGGGCATCCTTCTTTTCGGAGTAGTACCAATTTTTTTCCCTTCTGTAAGGAAAGAGCAATAGAGAAGAAAATGGAAGCTGATCCCTTGCCAAATTGGCTGTGGACAACTCAAGCTCCTTATGGCTGTGAAACTCTGATTCCACCCTTCTCTACTGCAGCATCATCAGGATTCCCTTCAACAATAATACCATCAGCTGCTGATAGTCAAATTCACTTTCCAAACATGACGATCCCCCACCCTCATTTCTCCACCTCAATCACCAATGCCAGCACCCTATCCCCTTTTACTGCAGGAGATGAAAGCAAATTCAATCATCGCAATGAAACAATTCAAAATCTTATATTCTGTATAAGAGGTAGGGAATGA 1506 0.4555 MVPYTSPPLFACPMDSSGSFNSSVVNADASTNTCDGDSCSCGDSFAYNFGILKKNPVDDGMSSEAVEISQAEGDNACIRTVQLFPGDNDLTELEIGHRFPGSSTKGWLDFSRKEICSGGEQGLKKLPQLQQRQQVKKSRRGPRSRSSEYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGFDADINFNIVDYDDDIKQMSNFTKEEFVQILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGREAVTNFEPSTYEREIISKANNEDSNQNLDLNLGIAPPCSSDSQMENSKHVSSFQVQHDWDDLPNDGRITFELSASRLSKAQPSRGISAASGHPSFRSSTNFFPFCKERAIEKKMEADPLPNWLWTTQAPYGCETLIPPFSTAASSGFPSTIIPSAADSQIHFPNMTIPHPHFSTSITNASTLSPFTAGDESKFNHRNETIQNLIFCIRGRE 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0967 501 CDD AP2 149 206 IPR001471 GO:0003700|GO:0006355
Dere02g0967 501 Gene3D AP2/ERF domain 239 298 IPR036955 GO:0003700|GO:0006355
Dere02g0967 501 Gene3D AP2/ERF domain 148 206 IPR036955 GO:0003700|GO:0006355
Dere02g0967 501 Pfam AP2 domain 239 289 IPR001471 GO:0003700|GO:0006355
Dere02g0967 501 Pfam AP2 domain 148 196 IPR001471 GO:0003700|GO:0006355
Dere02g0967 501 PRINTS Ethylene responsive element binding protein signature 241 252 IPR001471 GO:0003700|GO:0006355
Dere02g0967 501 PRINTS Ethylene responsive element binding protein signature 279 299 IPR001471 GO:0003700|GO:0006355
Dere02g0967 501 MobiDBLite consensus disorder prediction 129 148 - -
Dere02g0967 501 FunFam AP2-like ethylene-responsive transcription factor 239 299 - -
Dere02g0967 501 SUPERFAMILY DNA-binding domain 147 205 IPR016177 GO:0003677
Dere02g0967 501 CDD AP2 239 299 IPR001471 GO:0003700|GO:0006355
Dere02g0967 501 SUPERFAMILY DNA-binding domain 239 298 IPR016177 GO:0003677
Dere02g0967 501 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 120 341 - -
Dere02g0967 501 SMART rav1_2 240 303 IPR001471 GO:0003700|GO:0006355
Dere02g0967 501 SMART rav1_2 148 210 IPR001471 GO:0003700|GO:0006355
Dere02g0967 501 ProSiteProfiles AP2/ERF domain profile. 240 297 IPR001471 GO:0003700|GO:0006355
Dere02g0967 501 ProSiteProfiles AP2/ERF domain profile. 148 204 IPR001471 GO:0003700|GO:0006355
Dere02g0967 501 FunFam AP2-like ethylene-responsive transcription factor 147 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0967 Dere-ChrDere02 9189659 9192364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0967 57 333 AP2-EREBP Transcription Factor Family AT4G36920 61.837 1.29e-95 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Dere02g0967 AP2 1.2e-09 CL0081