Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0958 ATGACAAGGGGTGTCCTGATGAGCATTGATGGCGATGACAAAGAATTTCAAGAATTGGCTCAGCGTCTACGCGATGGTAAGAAAGCCAACAAAGAAGGAGTTGCTGGTGATGAACACAGTTTGCGTGAGGATGACGAGTTGAAAAGTAATGGGACAGCTGAAGAAGTTAAGGTTGGACAAGGGGGGATTGTGGATGACCCAGCTGTCCAGCATATATCACAACAACAGCCTCAAGGGGCAATTTGGGAGAGGTTCCTACATCTTAGATCCCTTAAGGTCCTGCTTGTGGAGATTGATGACTCTACTCGCCATGTGGTCGCTGCACTGCTTCGCAATTGTAGTTATGAAGTTATTGAAGCAGCAAATGGATTGCAAGCGTGGAAGATTTTGGAAGATCTAACAAATCACATAGATCTTGTATTAACTGAGGTAGCAATGCCTTGCTTATCAGGCATTAGCCTTCTATCCAAAATTATGGGTCACAAGACACGGAAAAACATTCCAGTAATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCTGTTGACTTTCTAGTGAAACCTATACGGAAGAATGAGCTTAAAAACCTGTGGCAGCATGTTTGGAGGAGATGTCATAGTTCGAGTGGTAGTGGAAGTGAAAGTGGCACACAAACTCAGAAATCCATTAAGTCAAAGAGTCTTGAGAAGTCTGATAACAACAGTGGCAGCAACGATGAAGACGACAATGGAAGTGTGGGTCTGAATAATGAGGATGGAAGTGACAATGGTAGTGGCACTCAGAGCTCGTGGACCAAACAAGCTGTAGAAGTTGACAGTCCCAAACCAGCATCCCAGTGGAATCATATAGCTGAGTGCCCTGATAGCACCTGTGCTCAAGTTGTTCTCTCAAATGCTGAAATGTGTGGAAACATAACCATAAAAGAGTGTCTGGATCAGAAGGAGCAGCTTGAGCTGAAAGTTGACTCCAGTAGGGATTTTGGATTGATTCTCGATTATAGAAATGAGGCTTTAGCCAATACATTGGGTGAAAAACTTAGCAACCCACTTGATATAGGCTCCACTAAATTCAATGAGCAGCTAAATAGAGGACAGCTGGAACTTAATTGTGAAAATCCATCAAGTAAGTTAAGTTGTAAAGGTCCATTTCTGTCTGATGCCATTACTAGTACATCTGATTTGTGGGTTCATGGTGGAGAATCTGAAGCCTCAAATAGAAGAGCCAAGCCCTCGGATATCGAAAACAAAGCTATTAATGATCATGAAGAATTGCCATCTCTTGAGCTTAGTTTAAAGAGACTTAGGGGGGTTAAAGATGCTGGGATTACAAATCAGGATGAGCGGAATGTTTTAAGGCGTTCAGACCTTTCAGCCTTTTCAAGGTACAATGCAGCCTCTAACGCTAAGAAGTCTCCTGCTGGTTGTGCTGGAAGCAACTCTCCCCATAATAATAGCTTAGAAGTTACAAAGAAAGATTCATCACGTGATGTCCAATCTCATTCTAGTGGCAATCCTCCTAACCAGAACTCAAATGGTGCAAGCAATAATATTGACATGGGCTCCACGACTGATAATGCTTTCACTAAATCTGCTGTCATAAGCAAGCCAACAGTGGCATCACTAACTAAATGTTTGTACCAATCATCTGCTTTCCAGCCTATAAACAACCACTTTATTTGTACCTCTCAACAAGTTGCAGTACATAATCCTAAAGACACGACAGCCTCTACTATGCTGGCACTGCCTAGAGGGGGCACAATTAAGGACTGTCCAACTCAGGACATCCATGGCCTTTACAACATGCAGCACCAGCTACCTCCTGACCATGATGATGCATCATCTAAGAAAATGGCTGCTGCACCTCCACATTGTGGCTCATCAAATGTAGTTGAAATGCTGGTTGAAGTTAATGCTGGAAATTATAGTATCAATAGAAGTGTGTCTGGAAGCAACAATGGAAGCAATGGACAAAATGGGAGCAGCACTGCAGTTAATGTCGGAGGGATAAAGATAGAAAGTATCAATGGAACTGCTGGGAATAGTGGAAGTGGTGATGCTAGTGGTAGTGGGAGTGGAAGTGGGAGTGGAAGTGCTAACAGAATAGATCAAAAAAAGACTTCTCAAAGAGAAGCAGCTTTAACTAAATTTCGCCAAAAGAGAAAGGAGAGGTGCTTCCGGAAAAAGGTTCGATATCAAAGCAGAAAAAAATTAGCTGAACAACGACCTCGTTTTCGTGGACAATTTATTCGACAGGCCTCAAACGAGAATACAAGTGAGGCAGCAGAGGCAACAGACAGCTGA 2325 0.4275 MTRGVLMSIDGDDKEFQELAQRLRDGKKANKEGVAGDEHSLREDDELKSNGTAEEVKVGQGGIVDDPAVQHISQQQPQGAIWERFLHLRSLKVLLVEIDDSTRHVVAALLRNCSYEVIEAANGLQAWKILEDLTNHIDLVLTEVAMPCLSGISLLSKIMGHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSIKSKSLEKSDNNSGSNDEDDNGSVGLNNEDGSDNGSGTQSSWTKQAVEVDSPKPASQWNHIAECPDSTCAQVVLSNAEMCGNITIKECLDQKEQLELKVDSSRDFGLILDYRNEALANTLGEKLSNPLDIGSTKFNEQLNRGQLELNCENPSSKLSCKGPFLSDAITSTSDLWVHGGESEASNRRAKPSDIENKAINDHEELPSLELSLKRLRGVKDAGITNQDERNVLRRSDLSAFSRYNAASNAKKSPAGCAGSNSPHNNSLEVTKKDSSRDVQSHSSGNPPNQNSNGASNNIDMGSTTDNAFTKSAVISKPTVASLTKCLYQSSAFQPINNHFICTSQQVAVHNPKDTTASTMLALPRGGTIKDCPTQDIHGLYNMQHQLPPDHDDASSKKMAAAPPHCGSSNVVEMLVEVNAGNYSINRSVSGSNNGSNGQNGSSTAVNVGGIKIESINGTAGNSGSGDASGSGSGSGSGSANRIDQKKTSQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRFRGQFIRQASNENTSEAAEATDS 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0958 774 SMART REC_2 91 206 IPR001789 GO:0000160
Dere02g0958 774 Pfam CCT motif 717 759 IPR010402 GO:0005515
Dere02g0958 774 MobiDBLite consensus disorder prediction 215 232 - -
Dere02g0958 774 MobiDBLite consensus disorder prediction 711 726 - -
Dere02g0958 774 MobiDBLite consensus disorder prediction 727 742 - -
Dere02g0958 774 MobiDBLite consensus disorder prediction 683 774 - -
Dere02g0958 774 MobiDBLite consensus disorder prediction 683 710 - -
Dere02g0958 774 CDD psREC_PRR 93 196 - -
Dere02g0958 774 ProSiteProfiles Response regulatory domain profile. 92 210 IPR001789 GO:0000160
Dere02g0958 774 ProSiteProfiles CCT domain profile. 717 759 IPR010402 GO:0005515
Dere02g0958 774 SUPERFAMILY CheY-like 89 215 IPR011006 -
Dere02g0958 774 Gene3D - 90 248 - -
Dere02g0958 774 MobiDBLite consensus disorder prediction 408 428 - -
Dere02g0958 774 MobiDBLite consensus disorder prediction 26 50 - -
Dere02g0958 774 MobiDBLite consensus disorder prediction 246 282 - -
Dere02g0958 774 MobiDBLite consensus disorder prediction 476 530 - -
Dere02g0958 774 MobiDBLite consensus disorder prediction 476 495 - -
Dere02g0958 774 PANTHER TWO-COMPONENT RESPONSE REGULATOR 91 388 IPR045279 GO:0009736
Dere02g0958 774 MobiDBLite consensus disorder prediction 755 774 - -
Dere02g0958 774 MobiDBLite consensus disorder prediction 405 428 - -
Dere02g0958 774 FunFam Two-component response regulator-like PRR37 91 249 - -
Dere02g0958 774 Pfam Response regulator receiver domain 93 204 IPR001789 GO:0000160
Dere02g0958 774 MobiDBLite consensus disorder prediction 506 530 - -
Dere02g0958 774 MobiDBLite consensus disorder prediction 215 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0958 Dere-ChrDere02 9132546 9140773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0958 167 761 Response Regulator Gene Family AT5G02810 47.173 3.17e-124 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Dere02g0958 Response_reg 1.7e-20 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g0958 02 9132546 9140773 Dere02g0958 02 9132546 9140773 ECH