Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0956 ATGGATGTTGAGGAAGCAGAAAGAGTAGTAATTGCAAAACCAGTTGCTTCAAGGCCTACTTGCTCCACCTTTAGATCTTTCTCAGAGCTACTTGCTGTTGCCATTAATGCCTCTTCTTCCTCTGTTCTTGCTTCTCAAACCAAAGTCTCAGCCATTAGACCCAAAACTGTGAGGTTCAAACCATCCCCGAATCACCGTCCTGCTGCTGCTGGGTTTGTTTCTTCTCAGTCTGTAAAATCTGACAAGATTTACAAGCCAATGGCAAAACTTGTATCAAAGACCACTGTCTCTCTTTTGGCAAATATGGGAAATGGCTGTACTGGTCATCATCAACATACACTGCAAGAAAAGTTCAGAACCAATTTGAGCTCAAATAGTAATACCCCACAAGCAACCGAACCTTGTAAGGTGGTACCACAGAACATAGAGGAGGACCCAAAGGCTTTAACTTCCACAAGTCATGGTGATCGACCTTCATATGATGGATACAATTGGAGGAAATATGGGCAGAAGCAGGTTAAAGGAAGTGAGCATCCGAGGAGTTATTATAAATGCACATATCCTAATTGTCCAGTGAAGAAGAAGGTGGAAAGATCATTTGACGGACAAATTGCAGAAATAGTATATAAAGGTGAGCACAATCATTCAAAGCCTCAGCCTCCTAAGCGAAACTCAGCTGCAGGATCAGGAATGGTAGGTGATGGAATGGGTCAAGATAGTAACACTAACAACAATCTATGGAGTAATGACAATGGTGAGAGGAATGAAGGTAGAACAACATTGGTTGGGGGAGGAGGAAGCCTTGAGAATTCGTGTGGTCAAAGTGGGGATTGTGAGGAAGGAGGAGGCAAGGTGTTTGAGGCAGAGGAAGATGAACCTAGAAGCAAAAGAAGGAAAAATGAGAGTCAATCCAATGAAAGAGCGGTTTCAGAGGAAGCTCGAGTTGTGGTGCAAAGTTCTACAGATCCAGAAATAGTGGGAGATGGCTTTCGCTGGAGGAAATATGGGCAAAAGGTTGTGAAGGGCAATCCATATCCCAGAAGTTACTATAGATGCACTAATATAAAGTGTAAGGTGCGAAAACACGTGGAAAGAGCTTTAGATGATCCAAGAGCATTTATCACCAAGTATGAGGGAAAGCACAACCATGAGATGCCACTCAGGAACAATGAGAAAGATTCACAGGCCCATCTTACTCTTCGTAAAGACAAGCCAAGATTAATGCTTAACAGTATAACCCAGTAG 1245 0.4289 MDVEEAERVVIAKPVASRPTCSTFRSFSELLAVAINASSSSVLASQTKVSAIRPKTVRFKPSPNHRPAAAGFVSSQSVKSDKIYKPMAKLVSKTTVSLLANMGNGCTGHHQHTLQEKFRTNLSSNSNTPQATEPCKVVPQNIEEDPKALTSTSHGDRPSYDGYNWRKYGQKQVKGSEHPRSYYKCTYPNCPVKKKVERSFDGQIAEIVYKGEHNHSKPQPPKRNSAAGSGMVGDGMGQDSNTNNNLWSNDNGERNEGRTTLVGGGGSLENSCGQSGDCEEGGGKVFEAEEDEPRSKRRKNESQSNERAVSEEARVVVQSSTDPEIVGDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCKVRKHVERALDDPRAFITKYEGKHNHEMPLRNNEKDSQAHLTLRKDKPRLMLNSITQ 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0956 414 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 89 394 IPR044810 GO:0003700
Dere02g0956 414 FunFam WRKY transcription factor 149 219 - -
Dere02g0956 414 SMART WRKY_cls 326 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g0956 414 SMART WRKY_cls 159 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g0956 414 FunFam WRKY transcription factor 311 387 - -
Dere02g0956 414 SUPERFAMILY WRKY DNA-binding domain 157 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g0956 414 Pfam WRKY DNA -binding domain 161 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g0956 414 Pfam WRKY DNA -binding domain 328 384 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g0956 414 MobiDBLite consensus disorder prediction 210 316 - -
Dere02g0956 414 ProSiteProfiles WRKY domain profile. 321 386 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g0956 414 ProSiteProfiles WRKY domain profile. 161 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g0956 414 MobiDBLite consensus disorder prediction 287 308 - -
Dere02g0956 414 MobiDBLite consensus disorder prediction 235 256 - -
Dere02g0956 414 SUPERFAMILY WRKY DNA-binding domain 321 386 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g0956 414 Gene3D WRKY domain 310 387 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g0956 414 Gene3D WRKY domain 144 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0956 Dere-ChrDere02 9126050 9127770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0956 83 387 WRKY Transcription Factor Family AT2G37260 50.296 2.04e-92 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere02g0956 WRKY 3.6e-24 CL0274