Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0955 ATGTTTCCCTTTCAAGTTAGCTTCGGAGGTGATCCAGTGAGGCACGGTGCTTCGAATACCGATGGGGATTTTCCGAGCAAAAAGAAGCCAATGAGGAAACTATTTGGAATCTTTTCGATTACTGTTCTTTCTGGCATCTCTAGGGGCAAAGGAAGAGAAAGCATGGGTTGGATTCCATGTTCTGGAAATCCAAATGGTAAGAAAAAGAGAAAGAATAAGATGAAGAAGATGGAAGTGGAGCAGAGCATGGTTGATCAGACCAAACCAACCCCAGGGAAGTTGAAGAGGAACTCATCCACTCATTCCAAAGATCCCTCTAAAAGTGGGAATTCTGATCACATTGCGGCTCAGACTTTCACATTCCGTGAGTTAGCAACTGCAACTAGAAATTTTAGGACAGAATGTCTTTTGGGCGAGGGTGGTTTTGGTAGAGTATACAAAGGGCGTTTCGAAAGTACTAATCAGGTTGTTGCAATTAAGCAACTTGACCGAGATGGGCTGCAAGGGAATAGAGAGTTCCTTGTTGAAGTGTTGATGTTAAGTCTACTTCATCACCCTAACCTTGTCAATCTCATTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTAGTTTATGAATATATGCCGTTAGGATCCTTGGAAGACCACTTATATGATATTTCTCCTGCCAAAAAACTACTTGACTGGAATACACGGATGAAAATTGCTGCTGGGGCAGCAAAGGGATTGGAGTATCTACATGACAAAGCTAACCCTCCTGTCATATACCGAGATTTAAAGTGCTCAAACATTTTGCTTGGTGAAGGTTATCATCCAAAGCTATCTGATTTTGGCTTGGCTAAACTTGGACCTGTTGGAGAAAACACCCACGTATCGACAAGGGTTATGGGTACCTATGGATATTGTGCTCCAGAGTATGCAATGACAGGCCAGCTGACTCTGAAATCTGATGTTTATAGCTTTGGCATAGTTCTTCTGGAAATTATTACTGGAAGGAAAGCCATTGACAATTCAAAAGCTGCAGGAGAGCAGAATCTTGTTGCATGGGCTAAACCCTTGTTTAAAGATCGAAGAAAGTTTTCACAAATGGCTGATCCAATGCTCCAAGGTCAGTATCCTCCAAGAGGCTTATATCAAGCCCTTGCTGTTGCTGCAATGTGTGTTCAGGAGGAAGCTAATATGCGCCCAGTTATAGCTGATGTTGTCACTGCTTTGTCTTACCTTGCTTCCCAAAGATATGACCCCAATTCACATTCTCTTCAAAGCCCTCGCCTTGCTCCTGCTACTCCTACAACCAAGAGGGGACGATGA 1311 0.431 MFPFQVSFGGDPVRHGASNTDGDFPSKKKPMRKLFGIFSITVLSGISRGKGRESMGWIPCSGNPNGKKKRKNKMKKMEVEQSMVDQTKPTPGKLKRNSSTHSKDPSKSGNSDHIAAQTFTFRELATATRNFRTECLLGEGGFGRVYKGRFESTNQVVAIKQLDRDGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLYDISPAKKLLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGIVLLEIITGRKAIDNSKAAGEQNLVAWAKPLFKDRRKFSQMADPMLQGQYPPRGLYQALAVAAMCVQEEANMRPVIADVVTALSYLASQRYDPNSHSLQSPRLAPATPTTKRGR 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0955 436 FunFam Serine/threonine-protein kinase PBS1 208 423 - -
Dere02g0955 436 CDD STKc_IRAK 137 405 - -
Dere02g0955 436 MobiDBLite consensus disorder prediction 54 112 - -
Dere02g0955 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Dere02g0955 436 MobiDBLite consensus disorder prediction 1 28 - -
Dere02g0955 436 SUPERFAMILY Protein kinase-like (PK-like) 113 405 IPR011009 -
Dere02g0955 436 Pfam Protein kinase domain 134 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0955 436 MobiDBLite consensus disorder prediction 414 436 - -
Dere02g0955 436 Gene3D Transferase(Phosphotransferase) domain 1 208 422 - -
Dere02g0955 436 SMART serkin_6 131 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0955 436 ProSiteProfiles Protein kinase domain profile. 131 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0955 436 PIRSF TyrPK_CSF1-R 218 434 - -
Dere02g0955 436 PIRSF TyrPK_CSF1-R 41 120 - -
Dere02g0955 436 PIRSF TyrPK_CSF1-R 129 223 - -
Dere02g0955 436 PANTHER OS07G0668900 PROTEIN 75 417 - -
Dere02g0955 436 FunFam Serine/threonine-protein kinase PBS1 103 207 - -
Dere02g0955 436 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524
Dere02g0955 436 Gene3D Phosphorylase Kinase; domain 1 101 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0955 Dere-ChrDere02 9120896 9124481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0955 95 410 Glycoside Hydrolase AT3G07070 66.972 4.33e-164 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dere02g0955 Pkinase 2.2e-45 CL0016