Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0946 ATGGAAGAAATAGCAACCATCATGGCTGCACTCTCCACTCTCTCACCTTCCAACCTCTCCCATCTCACCCACTCCCTCCTCTCCGCCACCCACCACCAACACCTCCGCCTCTCCTCCCTCCTCTCCTCCCCAACCCTCTTTTCCTTAACTCTCCGTTACCTCCACTCTCTCTCTCTCCCCCACAAGACCCTCCTCATCGCTCGCCACCTCCTCTCCCTTCTCCACCTCCTCACGCGCCACTTCCAATCCACCCACGCTACCCCACCTCCGCCCTTGTCCACCGCCATCCGGCAGCGTGATCTGGACGCCGTTCTCCTCCTCCTCTTGTTCTGCGAAACCCACCAACACAACCCAGAAGCCCTCGAGGCCAACCATTCGGATTGGCGCGAGAACTTCAGTAAGCTTTTTTCTGAGAAGTCGTTGACGCTTTCTTATTCTCCCATAGGTGCGTGTGCTTGGACGGTTTTGATTCCGTACGTTGAGACGGTGAGCCGGTGCTGGAGACTGGTGGGTGCAATGGGTCGCGGTGGCGGAAAGGAGCCGGGGGAGGTGGCTGCGTCGGCGGCGGCGGTGGTGGGTCTTCCGGCGGTGGAAGTGAAGGCGGGTGGAACAAGAGAGTGTGTGATATGTAAAGAGGTGATGGAAGAAGGGAGGGATGTGTGTGAGTTGCCATGTCAGCACTTATTTCACTGGACGTGTATATTGCCGTGGCTGAGGAAGAGGAACACGTGTCCTTGCTGTCGGTTCCGGTTGCCGTCCGATGATGTCTTAGGAGAGATCCAACGGTTATGGGAAGTGTTAGTTAAAATAGGTGGTAGAGACTTGTTTGATTCATAG 837 0.5639 MEEIATIMAALSTLSPSNLSHLTHSLLSATHHQHLRLSSLLSSPTLFSLTLRYLHSLSLPHKTLLIARHLLSLLHLLTRHFQSTHATPPPPLSTAIRQRDLDAVLLLLLFCETHQHNPEALEANHSDWRENFSKLFSEKSLTLSYSPIGACAWTVLIPYVETVSRCWRLVGAMGRGGGKEPGEVAASAAAVVGLPAVEVKAGGTRECVICKEVMEEGRDVCELPCQHLFHWTCILPWLRKRNTCPCCRFRLPSDDVLGEIQRLWEVLVKIGGRDLFDS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0946 278 ProSiteProfiles Zinc finger RING-type profile. 207 248 IPR001841 -
Dere02g0946 278 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 179 254 IPR013083 -
Dere02g0946 278 CDD RING-H2_PA-TM-RING 206 248 - -
Dere02g0946 278 SUPERFAMILY RING/U-box 202 253 - -
Dere02g0946 278 SMART ring_2 207 247 IPR001841 -
Dere02g0946 278 Pfam Ring finger domain 206 248 IPR001841 -
Dere02g0946 278 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 122 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0946 Dere-ChrDere02 9024705 9025541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0946 2 269 C3H Transcription Factor Family AT5G02750 55.160 1.21e-83 251