Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0940 ATGTCGTCTATGGAGCTCCCCTTCTTTAACCAATCCCTGGAGCTGCTCCACCTGCCACGTCAACATGTCTCCCCTCCCACTCTCGGCGAGCTCCTCAAACGCGTCGACGAGGCTCAAAACGACACCCCACCCCACCGTATCCTCCGCCTCCCGCCCACTTCTTCCTCCTACCCCTTTCTTCTCTCCTTCACTAATTTAACTTACAGTGTCAGAGTCCGCCGCAGAATGAGCCTCCCTTCCAGCTTCTCTCAAAGCCACGTCGTTTCTGATCAAACCCAGACCAAAAAGAGCACCAAGATTTTACTCAATGACATATCCGGCGAGGCCAGAGACGGCCAAATCATGGGCGTCCTCGGCGCCAGCGGCTCCGGCAAATCCACCCTCATTGACGCCCTCGCCGATCGCATCTCCAAGGACAGCTTGAAAGGCTCCGTCACCTTGAACGGCGAAGCTTTGGAGTCAAGCCTTCTCAAAGTCATTTCTGCTTACGTCATGCAAGACGACCTTCTCTTCCCCATGCTCACCGTGGAAGAGACCCTCATGTTCTCCGCCGAGTTCCGCCTCCCGCGCTCACTCTCTAGCTCCAAGAAGAAAGCCAGAGTCCAAGCACTCATCGACCAGTTAGGCCTCCGGAATGCCGCCAAAACAGTCATCGGCGACGAGGGCCACCGCGGCGTCTCAGGAGGCGAAAGGCGTCGCGTCTCTATCGGAATCGACATCATCCACGACCCAATCATCTTGTTCCTGGACGAACCCACTTCAGGACTGGACTCCACCAGTGCCTTCATGGTCGTCAAAGTTCTGCAGCGAATCGCTCAGAGTGGGAGCATCGTCATCATGTCCATACACCAACCCAGTTATAGAATCCTGGGGCTATTAGACCGTTTGATTTTCCTCTCTCACGGCCAGGCCGTTTACTCCGGCTCTCCCACCAATGTCCTGCGCTTCTTCTCGGAGTTCGGGCACCCGATACCGGAGAACGAGAACCGGATCGAGTTCGCGCTGGACCTTATTCGTGAACTGGAAGAGTCACCCGGTGGAACCCAGAGCCTAGTGGAGTTCAATAAATCGTGGCAGTTAAATGCCGCGAAAAACGACAAACCAACTACGTATAACAAATTCCTCAACGGAACACTCAAGGACGCCATCGGAGCTAGCATTTCCAGAGGTAAATTAGTGTGCGGTGCACCCCATCATTCCCACGTTACAACCTCATCGGTTCCGACTTTTGCGAATCCGTTCTGGATCGAGATGGCCGTGATAGCCAAACGTTCACTCACCAATTCCAGAAGAATGCCAGAACTATTCGGAATCCGACTCGGTGCGGTTCTCGTAACCGCAGGAATCTTAGCCACCATTTTCTGGCATCTAGATAATACTCCTAAAGGAGTTCAAGAGCGTCTCGGCTTCATCGCCTTCGCTATGTCCACCACCTTCTACACCTGCGCCGACGCCTTCCCTGTCTTCCTTCAAGAGCGATACATATTCATGAGAGAAACAGCTTACAACGCATACCGCCGTTGGTCCTACGTGCTTGCCCATTCCGTCATCTCCATCCCCTCCTTGCTTATCCTCTCTTTAGCATTCGCCGCCACCACATTCTGGTCGGTGGGTCTAGCCGGCGGCTCCTCGGGCTTCCTATTCTACTTCCTCATCATATTCGCCTCCTTCTGGGCGGGAAGCTCCTTCGTGACGTTCCTGTCGGGGATAATTTCCCACGTGATGTTGGGATTTACTGTGGTGGTTGCAATTCTAGCTTACTTCCTTCTGTTCAGCGGATTCTTCATAAGCAGAGACAGAATTCCACTGTACTGGATATGGTTTCACTATGTGTCGCTGGTGAAGTACCCGTACGAGGGGGTGTTGCTGAACGAGTTCGGGGTTGAGCCTCCGAGGTGTTTCGTGAGGGGGACTCAGATGTTCGATAATACGCCGTTGGGGGAGGTGACGACGTCGTTGAAGGTGGAGCTGCTCAAGAGTATGAGCAAGACGTTGGGGATAAACATCACCAGTGAAACCTGCGTGACCACGGGTCTGGATATACTGAAGCAGCAGGGAATTACAGAGCTCGACAAGTGGAGCTGCTTGTGGATAACGGTTGCTTGGGGATTTTTCTTTAGGATTTTGTTTTATTTGACGTTGGTGTTTGGAAGCAAGAACAAGAGGAGTTAA 2172 0.5299 MSSMELPFFNQSLELLHLPRQHVSPPTLGELLKRVDEAQNDTPPHRILRLPPTSSSYPFLLSFTNLTYSVRVRRRMSLPSSFSQSHVVSDQTQTKKSTKILLNDISGEARDGQIMGVLGASGSGKSTLIDALADRISKDSLKGSVTLNGEALESSLLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSSSKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDRLIFLSHGQAVYSGSPTNVLRFFSEFGHPIPENENRIEFALDLIRELEESPGGTQSLVEFNKSWQLNAAKNDKPTTYNKFLNGTLKDAIGASISRGKLVCGAPHHSHVTTSSVPTFANPFWIEMAVIAKRSLTNSRRMPELFGIRLGAVLVTAGILATIFWHLDNTPKGVQERLGFIAFAMSTTFYTCADAFPVFLQERYIFMRETAYNAYRRWSYVLAHSVISIPSLLILSLAFAATTFWSVGLAGGSSGFLFYFLIIFASFWAGSSFVTFLSGIISHVMLGFTVVVAILAYFLLFSGFFISRDRIPLYWIWFHYVSLVKYPYEGVLLNEFGVEPPRCFVRGTQMFDNTPLGEVTTSLKVELLKSMSKTLGINITSETCVTTGLDILKQQGITELDKWSCLWITVAWGFFFRILFYLTLVFGSKNKRS 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0940 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 320 IPR027417 -
Dere02g0940 723 Coils Coil 324 344 - -
Dere02g0940 723 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 46 711 - -
Dere02g0940 723 Gene3D - 88 320 IPR027417 -
Dere02g0940 723 Pfam ABC transporter 102 254 IPR003439 GO:0005524
Dere02g0940 723 FunFam ABC transporter G family member 6 90 317 - -
Dere02g0940 723 Pfam ABC-2 type transporter 420 626 IPR013525 GO:0016020|GO:0140359
Dere02g0940 723 ProSitePatterns ABC transporters family signature. 226 240 IPR017871 GO:0005524|GO:0016887
Dere02g0940 723 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 87 326 IPR003439 GO:0005524
Dere02g0940 723 SMART AAA_5 111 326 IPR003593 GO:0016887
Dere02g0940 723 Pfam ABC-2 type transporter 283 361 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0940 Dere-ChrDere02 8994893 8997064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0940 101 323 Calmodulin-binding Proteins AT2G36910 28.261 9.38e-12 67.0