Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0917 ATGGAGAGCGAGAAACCAAATTGGTTTGAAAGAGTGAAGCCATTCATAGCTGTTGTATTCTTGCAGACTGGATTTGCAGGCATGGATGTTCTATCCAAGGCTGCACTGAACAAGGGGATGAGCAATTATGTGCTTGTTGTCTACCGCCATGCCGTTGCCTTTTTGGTCGTCACCCCTTTTGCAGTGATCCTGGACAAGAAAGTTAGGCCAAAGATGACATTTTCAATCTTCATGAAGATAGTGGCACTCAGCGTGCTAGAGCCAGTTATTGACCAAAATTTGTACTTTCTGGGAATGAAGTACACGACAGCAACGTTTGCCGCTGCAATGACTAATATTCTTCCTGCCATCACCTTCGTCATGGCTTGCATTCTCAGGCTTGAGAAGTTGAAAATAAGAAGTATACGCAGCCAAGCCAAGTTGTTTGGGACTTCAGCAACTGTTGCTGGAGCGATGGTCATGACACTGATGAAAGGCCCGGTGCTTGAATTATTTGGGACACATGGAAACAACAGCAACAACCAGCATAGTGGCAGGGTAAATCTTCAACACGCTGTAAAGGGATCTCTGATGATCACAATTGGCTGCTTTAGCTGGGCTTGTTTCATGATTCTCCAAGCAATAACCCTTGAAACCTACCCAGCTGAGCTCTCTCTTACAGCATGGATATGCCTGTTGGGAACAGCTGAAGGTGCCATAGTTGCCCTGGTAATGGAAAGGGGCAACCTTTCGATTTGGTCTTTAGATTGGGATACAAAATTGCTGGCCGCTGTCTACAGTGGCATAGTCTGCTCAGGACTGGCTTATTACATCCAAGGAGTAGTGATGAAAACTAGAGGACCAGTATTCGTTACAGCGTTTAGTCCCCTCTGTATGGTTATTGTGGCTGTCATGGGGTCGTTCATTCTAGCTGAGCAATTGTACCTTGGAAGGGTGATCGGTGCCATGATCATTGTTGTGGGCTTGTACCTTGTGGTGTGGGGTAAAAGCAAAGATTACGACTCACCAACTCCAATTACCAAGGAGCATATATCGCCAGCCAAGTTCATTGTAGATGAGGGCAATGCTGGAAAGGAGCATTCTAACCACGAGGTCATCACTATCACTAATTTGGAACAGGAACTATAA 1128 0.4566 MESEKPNWFERVKPFIAVVFLQTGFAGMDVLSKAALNKGMSNYVLVVYRHAVAFLVVTPFAVILDKKVRPKMTFSIFMKIVALSVLEPVIDQNLYFLGMKYTTATFAAAMTNILPAITFVMACILRLEKLKIRSIRSQAKLFGTSATVAGAMVMTLMKGPVLELFGTHGNNSNNQHSGRVNLQHAVKGSLMITIGCFSWACFMILQAITLETYPAELSLTAWICLLGTAEGAIVALVMERGNLSIWSLDWDTKLLAAVYSGIVCSGLAYYIQGVVMKTRGPVFVTAFSPLCMVIVAVMGSFILAEQLYLGRVIGAMIIVVGLYLVVWGKSKDYDSPTPITKEHISPAKFIVDEGNAGKEHSNHEVITITNLEQEL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0917 375 Pfam EamA-like transporter family 24 135 IPR000620 GO:0016020
Dere02g0917 375 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Dere02g0917 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Dere02g0917 375 PANTHER WAT1-RELATED PROTEIN 13 333 IPR030184 GO:0016020|GO:0022857
Dere02g0917 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0917 Dere-ChrDere02 8766146 8769130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0917 2 374 Nodulin-like Gene Family AT2G37460 64.343 4.77e-176 493